RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 JMJD8Q96S16 334 aa14.85□□□□□ -0.03
NEK9-204ENST00000554258 SPATA9Q9BWV2 254 aa14.85□□□□□ -0.03
NEK9-204ENST00000554258 ZNF350Q9GZX5 532 aa14.85□□□□□ -0.03
NEK9-204ENST00000554258 POLE3Q9NRF9 147 aa14.85□□□□□ -0.03
NEK9-204ENST00000554258 ZNF337Q9Y3M9 751 aa14.85□□□□□ -0.03
NEK9-204ENST00000554258 NPIPB9F8W1W9 429 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 H3BML4 177 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 NME4O00746 187 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 GCM2O75603 506 aaPredicted RBP14.84□□□□□ -0.03
NEK9-204ENST00000554258 REM1O75628 298 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 ATP5HO75947 161 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 NGFRP08138 427 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 FABP6P51161 128 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 PSMD4P55036 377 aaKnown RBP14.84□□□□□ -0.03
NEK9-204ENST00000554258 EFR3AQ14156 821 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 P2RY6Q15077 328 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 SYPL1Q16563 259 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 GCNT6Q5T4J0 391 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 PRAMEF8Q5VWM4 474 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 PRAMEF7Q5VXH5 474 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 C16orf89Q6UX73 402 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 LRRC74BQ6ZQY2 392 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 ZAR1Q86SH2 424 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 ANKFN1Q8N957 763 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 LINC01356Q8N9X3 169 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 OR10A6Q8NH74 314 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 KISS1RQ969F8 398 aaPredicted RBP14.84□□□□□ -0.03
NEK9-204ENST00000554258 RADILQ96JH8 1075 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 ADOQ96SZ5 270 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 PKP2Q99959 881 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 SLC38A1Q9H2H9 487 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 BCL2L10Q9HD36 194 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 FKBP7Q9Y680 259 aa14.84□□□□□ -0.03
NEK9-204ENST00000554258 LOC390937A0A1W2PQ73 354 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 LRP5LA4QPB2 252 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 EBAG9O00559 213 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 FADS1O60427 444 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 FCMRO60667 390 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 HNRNPCL1O60812 293 aaKnown RBP14.83□□□□□ -0.04
NEK9-204ENST00000554258 STX11O75558 287 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 SLC7A2P52569 658 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 DSCR4P56555 118 aaPredicted RBP14.83□□□□□ -0.04
NEK9-204ENST00000554258 FOXL1Q12952 345 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 SPATS1Q496A3 300 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 FBLN7Q53RD9 439 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 CCNJQ5T5M9 372 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 USP43Q70EL4 1123 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 GABRG1Q8N1C3 465 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 OR4K17Q8NGC6 315 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 OIT3Q8WWZ8 545 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 EFHD2Q96C19 240 aaPredicted RBP14.83□□□□□ -0.04
NEK9-204ENST00000554258 USB1Q9BQ65 265 aaKnown RBP14.83□□□□□ -0.04
NEK9-204ENST00000554258 ECSITQ9BQ95 431 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 SPAG4Q9NPE6 437 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.83□□□□□ -0.04
NEK9-204ENST00000554258 P2RX2Q9UBL9 471 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 CD300AQ9UGN4 299 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 PMF1-BGLAPU3KQ54 211 aa14.83□□□□□ -0.04
NEK9-204ENST00000554258 DNAJA2O60884 412 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 CHRM4P08173 479 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 NR2F1P10589 423 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 KRT20P35900 424 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 CDK6Q00534 326 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 CHRNB3Q05901 458 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 GNA13Q14344 377 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 FXNQ16595 210 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 TYW3Q6IPR3 259 aaKnown RBP14.82□□□□□ -0.04
NEK9-204ENST00000554258 SLC22A25Q6T423 547 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 FRRS1Q6ZNA5 592 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 C16orf62Q7Z3J2 963 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 DEFB107AQ8IZN7 70 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 ZNF540Q8NDQ6 660 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 OR4C3Q8NH37 302 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 MAL2Q969L2 176 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 TMCO6Q96DC7 493 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 REXO5Q96IC2 774 aaKnown RBP14.82□□□□□ -0.04
NEK9-204ENST00000554258 BPESC1Q9GZL8 116 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 HOXD1Q9GZZ0 328 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 MTHFD2LQ9H903 347 aaPredicted RBP14.82□□□□□ -0.04
NEK9-204ENST00000554258 GLRX2Q9NS18 164 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 CALML5Q9NZT1 146 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 DSPPQ9NZW4 1301 aa14.82□□□□□ -0.04
NEK9-204ENST00000554258 A0A0G2JPF8 293 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 FAM220BPB1ANY3 271 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 HNRNPCL2B2RXH8 293 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 HNRNPCL3B7ZW38 293 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 PGM3O95394 542 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 UTS2O95399 124 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 H6PDO95479 791 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 HNRNPCL4P0DMR1 293 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 HSD17B1P14061 328 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 HK1P19367 917 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 ZFP36P26651 326 aaKnown RBP14.81□□□□□ -0.04
NEK9-204ENST00000554258 APEX1P27695 318 aaKnown RBP14.81□□□□□ -0.04
NEK9-204ENST00000554258 IL12BP29460 328 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 PCGF2P35227 344 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 EIF1AXP47813 144 aaKnown RBP14.81□□□□□ -0.04
NEK9-204ENST00000554258 GSK3BP49841 420 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 ATP12AP54707 1039 aa14.81□□□□□ -0.04
NEK9-204ENST00000554258 GAS1P54826 345 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms