RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DAPP51397 102 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 IL1RL1Q01638 556 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 SGCBQ16585 318 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 TMEM176BQ3YBM2 270 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-210ENST00000553950 RNFT1Q5M7Z0 435 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 WLSQ5T9L3 541 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 HBMQ6B0K9 141 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 VASNQ6EMK4 673 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 KLHL17Q6TDP4 642 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 IZUMO2Q6UXV1 221 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 TMPPEQ6ZT21 453 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 CHMP1BQ7LBR1 199 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 PRICKLE2Q7Z3G6 844 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 SLC46A3Q7Z3Q1 461 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
SHMT2-210ENST00000553950 ZNF555Q8NEP9 628 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 OR5J2Q8NH18 312 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 OR2V1Q8NHB1 315 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 NRG4Q8WWG1 115 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 TAAR8Q969N4 342 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 GPR137Q96N19 417 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 TAAR6Q96RI8 345 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 BARD1Q99728 777 aaKnown RBP13.05□□□□□ -0.32
SHMT2-210ENST00000553950 NPAS1Q99742 590 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 NIPSNAP1Q9BPW8 284 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 NAA11Q9BSU3 229 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-210ENST00000553950 DEFB127Q9H1M4 99 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 Q9H521 79 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 SMURF2Q9HAU4 748 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 TBC1D23Q9NUY8 699 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 NPIPA1Q9UND3 350 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 B3GALT5Q9Y2C3 310 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 HIF3AQ9Y2N7 669 aa13.05□□□□□ -0.32
SHMT2-210ENST00000553950 MAGED1Q9Y5V3 778 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-210ENST00000553950 FTCDNL1E5RQL4 147 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 H3BN98 237 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 EIF1AYO14602 144 aaKnown RBP13.04□□□□□ -0.32
SHMT2-210ENST00000553950 NDUFB2O95178 105 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 ASAH2BP0C7U1 165 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 FCGR2AP12318 317 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 POU2F1P14859 743 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 CPN1P15169 458 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 FUT1P19526 365 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 MAKP20794 623 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 IL11P20809 199 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 PTNP21246 168 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 FUT4P22083 530 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 SLC6A6P31641 620 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 DIO1P49895 249 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 LHX2P50458 406 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 RPS6KA3P51812 740 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 RAC3P60763 192 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 RPS4XP62701 263 aaKnown RBP13.04□□□□□ -0.32
SHMT2-210ENST00000553950 OR7A5Q15622 319 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 ZBED5Q49AG3 693 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 SMARCD3Q6STE5 483 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 PAQR6Q6TCH4 344 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 HDDC2Q7Z4H3 204 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 GGNQ86UU5 652 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 P3H2Q8IVL5 708 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 GALNT4Q8N4A0 578 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 EXD3Q8N9H8 876 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 Q8NA96 180 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 OR13C2Q8NGS9 318 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 ZNF184Q99676 751 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-210ENST00000553950 CHST11Q9NPF2 352 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 TMEFF2Q9UIK5 374 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-210ENST00000553950 MCTS1Q9ULC4 181 aaKnown RBP13.04□□□□□ -0.32
SHMT2-210ENST00000553950 BAIAP2Q9UQB8 552 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 SIGLEC7Q9Y286 467 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 SLC6A5Q9Y345 797 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 LIPGQ9Y5X9 500 aa13.04□□□□□ -0.32
SHMT2-210ENST00000553950 A0A1W2PNV4 684 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 TNFSF11O14788 317 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 EFNA2O43921 213 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 VAMP5O95183 116 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 SYNGR4O95473 234 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 GRPRP30550 384 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 CLDN18P56856 261 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 OR2B6P58173 313 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 PMS2P3Q13401 168 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 ZNF239Q16600 458 aaKnown RBP13.03□□□□□ -0.32
SHMT2-210ENST00000553950 TTC23Q5W5X9 447 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 UBQLNLQ8IYU4 475 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 FAR1Q8WVX9 515 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 SLC25A36Q96CQ1 311 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 ADGRG7Q96K78 797 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 MOGAT1Q96PD6 335 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 SLC29A1Q99808 456 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 PRDM14Q9GZV8 571 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 RIBC2Q9H4K1 309 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 IL20Q9NYY1 176 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 LUZP4Q9P127 313 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 RASD1Q9Y272 281 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 MGAQ8IWI9 3026 aa13.03□□□□□ -0.32
SHMT2-210ENST00000553950 NPIPB13A6NJU9 1138 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 NPIPB4C9JG80 1138 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 H0YAE9 185 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 M0R082 166 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms