RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 C2orf72A6NCS6 295 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 BCKDKO14874 412 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 SLC25A12O75746 678 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 CLDN14O95500 239 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 CNR1P21554 472 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 CD96P40200 585 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 APOBEC1P41238 236 aaKnown RBP13.06□□□□□ -0.32
SHMT2-208ENST00000553868 EIF1P41567 113 aaKnown RBP13.06□□□□□ -0.32
SHMT2-208ENST00000553868 DLX5P56178 289 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 TUBA3CQ13748 450 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 KEAP1Q14145 624 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 ZNF468Q5VIY5 522 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-208ENST00000553868 OR5M10Q6IEU7 315 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 RPL13AP3Q6NVV1 102 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 MTFR2Q6P444 385 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 TUBA3EQ6PEY2 450 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 KLHL17Q6TDP4 642 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 WDR88Q6ZMY6 472 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 LINC00696Q6ZRV3 163 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 RASSF6Q6ZTQ3 369 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 TMPRSS11FQ6ZWK6 438 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 C8orf59Q8N0T1 100 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-208ENST00000553868 FADS6Q8N9I5 356 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 NTNG2Q96CW9 530 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 BPIFA2Q96DR5 249 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 FAM46AQ96IP4 442 aaKnown RBP13.06□□□□□ -0.32
SHMT2-208ENST00000553868 MRGPRX4Q96LA9 322 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 CNBD2Q96M20 576 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 GRIP2Q9C0E4 1043 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 ENKD1Q9H0I2 346 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 SERINC1Q9NRX5 453 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 MED17Q9NVC6 651 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 BOKQ9UMX3 212 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-208ENST00000553868 GMPPBQ9Y5P6 360 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 EXPH5Q8NEV8 1989 aa13.06□□□□□ -0.32
SHMT2-208ENST00000553868 NINQ8N4C6 2090 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 TMED7-TICAM2A0A0A6YYA0 188 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 OR5H15A6NDH6 313 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 EFCAB9A8MZ26 197 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 H3BN98 237 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 ETV2O00321 342 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-208ENST00000553868 PIP5K1CO60331 668 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 CBR3O75828 277 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 WISP2O76076 250 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 PRKCAP17252 672 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 MYF6P23409 242 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 FKBP2P26885 142 aaKnown RBP13.05□□□□□ -0.32
SHMT2-208ENST00000553868 CRISP1P54107 249 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 PDK3Q15120 406 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 OR1C1Q15619 314 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.05□□□□□ -0.32
SHMT2-208ENST00000553868 SLC25A53Q5H9E4 307 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 TIGD3Q6B0B8 471 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 IGFL2Q6UWQ7 119 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 CHERPQ8IWX8 916 aaKnown RBP13.05□□□□□ -0.32
SHMT2-208ENST00000553868 SLC43A2Q8N370 569 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 CLDN22Q8N7P3 220 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 TEX47Q8TBZ9 253 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 ZBTB8AQ96BR9 441 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 SGTBQ96EQ0 304 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 C1GALT1C1Q96EU7 318 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 NR1H4Q96RI1 486 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-208ENST00000553868 PITX2Q99697 317 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 FOXC2Q99958 501 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 FAM173AQ9BQD7 235 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 TEX12Q9BXU0 123 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 NDEL1Q9GZM8 345 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 OSGIN1Q9UJX0 560 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 KLF13Q9Y2Y9 288 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-208ENST00000553868 TMED7Q9Y3B3 224 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 SPIN1Q9Y657 262 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-208ENST00000553868 HSPE1-MOB4S4R3N1 261 aa13.05□□□□□ -0.32
SHMT2-208ENST00000553868 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 KPNA4O00629 521 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 GNB5O14775 395 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 KLF4O43474 513 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 HCN1O60741 890 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 TRIM3O75382 744 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 RCBTB2O95199 551 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 WDPCPO95876 746 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 SAGP10523 405 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 CD46P15529 392 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 MST1P26927 711 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 ADH6P28332 368 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 GPR4P46093 362 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 SLC9A3P48764 834 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 ST13P50502 369 aaKnown RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 DSCR4P56555 118 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 NUP107P57740 925 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 CRYZQ08257 329 aaKnown RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 TOMM34Q15785 309 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 PLPPR5Q32ZL2 321 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 USP51Q70EK9 711 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 MDGA2Q7Z553 956 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 DEPDC4Q8N2C3 294 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 WDSUB1Q8N9V3 476 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 ACBD4Q8NC06 268 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 PFN4Q8NHR9 129 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms