RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 A0A1B0GX12 115 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SH3PXD2BA1X283 911 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 OR5H15A6NDH6 313 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 A6NL46 340 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 CLDN24A6NM45 220 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 GJE1A6NN92 205 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 MKRN2OSH3BPM6 223 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 M0R3G1 203 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PDLIM1O00151 329 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SOCS2O14508 198 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 FFAR1O14842 300 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 FRS3O43559 492 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 DENRO43583 198 aaKnown RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TPST2O60704 377 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 BCAS1O75363 584 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 RCBTB2O95199 551 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 GASTP01350 101 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 HIST1H2ABP04908 130 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 ALPLP05186 524 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 CELA2AP08217 269 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PRKAR1AP10644 381 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PRKACGP22612 351 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 IGFBP5P24593 272 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PEX2P28328 305 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 EIF2S3P41091 472 aaKnown RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SLC9A3P48764 834 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 DAPP51397 102 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 GAS1P54826 345 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TPD52P55327 224 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 NUP107P57740 925 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SUMO1P63165 101 aaKnown RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 ARG2P78540 354 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 IL1RL1Q01638 556 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF117Q03924 483 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PRKCDQ05655 676 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 MERTKQ12866 999 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TSPAN31Q12999 210 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SKP2Q13309 424 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TMED1Q13445 227 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 MED21Q13503 144 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TUBA3CQ13748 450 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 CD226Q15762 336 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 COL28A1Q2UY09 1125 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SLC25A53Q5H9E4 307 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 B3GNTL1Q67FW5 361 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 KDM4DQ6B0I6 523 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 FCRLBQ6BAA4 426 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 RPL13AP3Q6NVV1 102 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 C1orf94Q6P1W5 598 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TUBA3EQ6PEY2 450 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PODNL1Q6PEZ8 512 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 IZUMO2Q6UXV1 221 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 APOOLQ6UXV4 268 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 C16orf47Q6ZP98 133 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 MBOAT2Q6ZWT7 520 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 USP51Q70EK9 711 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 HIST3H2AQ7L7L0 130 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TSEN54Q7Z6J9 526 aaKnown RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 BEST3Q8N1M1 668 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SLC43A2Q8N370 569 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 DTX3Q8N9I9 347 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 GATSQ8NAP1 163 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PSD4Q8NDX1 1056 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SETD9Q8NE22 299 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 OR10G3Q8NGC4 313 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 OR4K5Q8NGD3 323 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 OR4C15Q8NGM1 316 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SLC7A13Q8TCU3 470 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TMEM239Q8WW34 195 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 NRG4Q8WWG1 115 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 HIST1H2ACQ93077 130 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 DDIT4LQ96D03 193 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SH3YL1Q96HL8 342 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 MRGPRX4Q96LA9 322 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF597Q96LX8 424 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 FEVQ99581 238 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 SLC29A1Q99808 456 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PIGQQ9BRB3 760 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 MESP1Q9BRJ9 268 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TMEM43Q9BTV4 400 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PRRG3Q9BZD7 231 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 UCK2Q9BZX2 261 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 CTPS2Q9NRF8 586 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PAPOLBQ9NRJ5 636 aaKnown RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 QPCTLQ9NXS2 382 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 MED11Q9P086 117 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 RHCGQ9UBD6 479 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 B4GALT7Q9UBV7 327 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 ICAM5Q9UMF0 924 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 WASF3Q9UPY6 502 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PCDHGA9Q9Y5G4 932 aaKnown RBP4.54□□□□□ -1.68
VTI1B-202ENST00000553619 PCNX3Q9H6A9 2034 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 EXPH5Q8NEV8 1989 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 MED13Q9UHV7 2174 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 ZFHX2Q9C0A1 2572 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TRAV17A0A0B4J275 112 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TRBV4-1A0A0J9YWV2 114 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CENPVL1A0A0U1RR11 272 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TMEM8BA6NDV4 472 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 UNC119BA6NIH7 251 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms