RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 C17orf82Q86X59 251 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SFTPA2Q8IWL1 248 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 ARL14Q8N4G2 192 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SAMD12Q8N8I0 201 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 RPS4Y2Q8TD47 263 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SNX33Q8WV41 574 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 PELI1Q96FA3 418 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 DDOQ99489 341 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 MAP3K3Q99759 626 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 C7orf50Q9BRJ6 194 aaKnown RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 THAP7Q9BT49 309 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 WACQ9BTA9 647 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SLA2Q9H6Q3 261 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 NIPAL2Q9H841 368 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 PDE7BQ9NP56 450 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 ING3Q9NXR8 418 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 COPZ2Q9P299 210 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 TEKT2Q9UIF3 430 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 GMEB2Q9UKD1 530 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 ERVK-19Q9WJR5 959 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 DTX4Q9Y2E6 619 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 HIF3AQ9Y2N7 669 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 THADAQ6YHU6 1953 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 A0A0B4J293 547 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 A0A0G2JMP0 313 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 A0A0X1KG70 313 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SYNDIG1LA6NDD5 238 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 CENPBD1B2RD01 187 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 MCIDASD6RGH6 385 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 FLRT2O43155 660 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 IL33O95760 270 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 PPICP45877 212 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 GDI2P50395 445 aaKnown RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 MMP15P51511 669 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SLC25A1P53007 311 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 EPHA4P54764 986 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 EMC4Q5J8M3 183 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 FNDC7Q5VTL7 733 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 FCRLBQ6BAA4 426 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SHISA5Q8N114 240 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 ASCC1Q8N9N2 400 aaKnown RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 DTWD2Q8NBA8 298 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 NPEPL1Q8NDH3 523 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SDR9C7Q8NEX9 313 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 OR4M2Q8NGB6 313 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 OR5J2Q8NH18 312 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 OR4K13Q8NH42 304 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 OR51Q1Q8NH59 317 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 TRMT10AQ8TBZ6 339 aaKnown RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 UBASH3BQ8TF42 649 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 RLN3Q8WXF3 142 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 TRIM63Q969Q1 353 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 RNF31Q96EP0 1072 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 MMABQ96EY8 250 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SLC46A1Q96NT5 459 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 OR1F2PQ96R84 312 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 MNTQ99583 582 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 SLC38A3Q99624 504 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 HDHD2Q9H0R4 259 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 PPIL3Q9H2H8 161 aaKnown RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF275Q9NSD4 429 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 LRIT1Q9P2V4 623 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 NLKQ9UBE8 527 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 MALT1Q9UDY8 824 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 NUFIP1Q9UHK0 495 aaKnown RBP11.82□□□□□ -0.52
SHMT2-205ENST00000553474 FBXL4Q9UKA2 621 aa11.82□□□□□ -0.52
SHMT2-205ENST00000553474 ELOA3DA6NLF2 546 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-205ENST00000553474 K7ESF4 209 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 HRKO00198 91 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 PDCD5O14737 125 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 CTDSPLO15194 276 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 HYAL3O43820 417 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-205ENST00000553474 FZD7O75084 574 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 GLCEO94923 617 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 TFP02787 698 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 IFNA16P05015 189 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 EIF4EP06730 217 aaKnown RBP11.81□□□□□ -0.52
SHMT2-205ENST00000553474 HPGDP15428 266 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 SPI1P17947 270 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 AHCYP23526 432 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 CD27P26842 260 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 DCAF7P61962 342 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 DMWDQ09019 674 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 ELOA3BQ3SY89 546 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 UNQ9370/PRO34162Q6UXP9 181 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 C1orf210Q8IVY1 113 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 FAM160A2Q8N612 972 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-205ENST00000553474 ELOA3Q8NG57 546 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 OR4M1Q8NGD0 313 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 OR4C3Q8NH37 302 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 GRPEL2Q8TAA5 225 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 ZMYND19Q96E35 227 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-205ENST00000553474 ZDHHC12Q96GR4 267 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 RBCK1Q9BYM8 510 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 KLHL1Q9NR64 748 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 WDR70Q9NW82 654 aa11.81□□□□□ -0.52
SHMT2-205ENST00000553474 COL5A1P20908 1838 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-205ENST00000553474 TRBV2A0A0J9YWF9 115 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 HSPB2A8KAH6 182 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 A8MU76 341 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms