RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FAM240BA0A1B0GVZ2 78 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 HELTA6NFD8 242 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 A6NIZ1 184 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 TRIM64CA6NLI5 447 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 A8MXQ7 604 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 HIP1O00291 1037 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 MMP23AO75900 390 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 SNAPINO95295 136 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 OXSR1O95747 527 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-210ENST00000553455 ETS2P15036 469 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 CDH4P55283 916 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 RAP1BP61224 184 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 CSNK1G2P78368 415 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 HMGN5P82970 282 aaKnown RBP3.6□□□□□ -1.83
SYNE2-210ENST00000553455 OGDHQ02218 1023 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 BST1Q10588 318 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 HERPUD1Q15011 391 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 PARP15Q460N3 678 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 CCDC14Q49A88 953 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 C6orf226Q5I0X4 101 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 CTSL3PQ5NE16 218 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 C11orf53Q8IXP5 236 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 NUS1Q96E22 293 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 CMTM7Q96FZ5 175 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 KCNA7Q96RP8 456 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 BFARQ9NZS9 450 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 BTNL2Q9UIR0 455 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 NAP1L2Q9ULW6 460 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-210ENST00000553455 ZNF646O15015 1829 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-210ENST00000553455 PLEKHH1Q9ULM0 1364 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 RLFQ13129 1914 aa3.6□□□□□ -1.83
SYNE2-210ENST00000553455 A0A0U1RQS6 177 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 A0A1W2PPV9 198 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 PSMB11A5LHX3 300 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 LOC110117498-PIK3R3F6TDL0 507 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 CXCR2P25025 360 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 RBMXP38159 391 aaKnown RBP3.59□□□□□ -1.83
SYNE2-210ENST00000553455 KIR2DS4P43632 304 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 APOC4P55056 127 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 LYZP61626 148 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 GNB2P62879 340 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 LRRC74AQ0VAA2 488 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 PLD1Q13393 1074 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 GK3PQ14409 553 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 C1orf100Q5SVJ3 147 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 HSDL2Q6YN16 418 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 RFLNAQ6ZTI6 216 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 H2BFWTQ7Z2G1 175 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 ECHDC2Q86YB7 292 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 ERI1Q8IV48 349 aaKnown RBP3.59□□□□□ -1.83
SYNE2-210ENST00000553455 CCDC71LQ8N9Z2 235 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 OR51S1Q8NGJ8 323 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 RPUSD4Q96CM3 377 aaKnown RBP3.59□□□□□ -1.83
SYNE2-210ENST00000553455 TCEANC2Q96MN5 208 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 HIST1H4GQ99525 98 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 ANKRD19PQ9H560 264 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 NMRAL1Q9HBL8 299 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 SUN2Q9UH99 717 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 KCNIP3Q9Y2W7 256 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 PHF3Q92576 2039 aaKnown RBP3.59□□□□□ -1.83
SYNE2-210ENST00000553455 KANK1Q14678 1352 aa3.59□□□□□ -1.83
SYNE2-210ENST00000553455 XKRY2A2RUG3 117 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 KLLNB2CW77 178 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 UBXN8O00124 270 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 HAS3O00219 553 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 ATP1B2P14415 290 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-210ENST00000553455 RPS2P15880 293 aaKnown RBP3.58□□□□□ -1.84
SYNE2-210ENST00000553455 MX1P20591 662 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 FUT3P21217 361 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 GSSP48637 474 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 CAV2P51636 162 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 ACTR3P61158 418 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 SELENOTP62341 195 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 TGFBR3Q03167 851 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 OR5I1Q13606 314 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 IL17AQ16552 155 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 MICBQ29980 383 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 SAMD4BQ5PRF9 694 aaKnown RBP3.58□□□□□ -1.84
SYNE2-210ENST00000553455 OTPQ5XKR4 325 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 SLC26A11Q86WA9 606 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 NBPF5PQ86XG9 351 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-210ENST00000553455 EGFL6Q8IUX8 553 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 ZNF740Q8NDX6 193 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 SDR9C7Q8NEX9 313 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 OR10G3Q8NGC4 313 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 NEIL3Q8TAT5 605 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 SETD7Q8WTS6 366 aaKnown RBP3.58□□□□□ -1.84
SYNE2-210ENST00000553455 DCUN1D4Q92564 292 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.58□□□□□ -1.84
SYNE2-210ENST00000553455 PHYHIPLQ96FC7 376 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 ZNF641Q96N77 438 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-210ENST00000553455 FMO2Q99518 471 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 TSG101Q99816 390 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 RNF167Q9H6Y7 350 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 NIPAL2Q9H841 368 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 AIG1Q9NVV5 245 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 TMCO1Q9UM00 188 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 ZNF256Q9Y2P7 627 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-210ENST00000553455 NPTNQ9Y639 398 aa3.58□□□□□ -1.84
SYNE2-210ENST00000553455 NSG1A0A0A6YYJ2 146 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms