RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 EPXP11678 715 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 OR3A2P47893 321 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 TLE4Q04727 773 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 KRT72Q14CN4 511 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 OR7A5Q15622 319 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 CYBRD1Q53TN4 286 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 TMEM43Q9BTV4 400 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 SF3B5Q9BWJ5 86 aaKnown RBP16.39■□□□□ 0.21
CPSF2-202ENST00000553427 PRR14Q9BWN1 585 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 C12orf49Q9H741 205 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 TESMINQ9Y4I5 508 aa16.39■□□□□ 0.21
CPSF2-202ENST00000553427 TRAV36DV7A0A075B6V5 113 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 FAM221AA4D161 298 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 RAMP1O60894 148 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 VAMP5O95183 116 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 PSMB1P20618 241 aaKnown RBP16.38■□□□□ 0.21
CPSF2-202ENST00000553427 P2RY4P51582 365 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 CDH12P55289 794 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 SNTB1Q13884 538 aaKnown RBP16.38■□□□□ 0.21
CPSF2-202ENST00000553427 SLC17A1Q14916 467 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 LRRC23Q53EV4 343 aaPredicted RBP16.38■□□□□ 0.21
CPSF2-202ENST00000553427 ENTPD8Q5MY95 495 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 OTUD3Q5T2D3 398 aaPredicted RBP16.38■□□□□ 0.21
CPSF2-202ENST00000553427 FAM69AQ5T7M9 428 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 LINC00114Q6XXX2 140 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 CCDC103Q8IW40 242 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 GABRG1Q8N1C3 465 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 CCDC197Q8NCU1 140 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 KTI12Q96EK9 354 aaPredicted RBP16.38■□□□□ 0.21
CPSF2-202ENST00000553427 DNAJA3Q96EY1 480 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 EPYCQ99645 322 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 ARL8BQ9NVJ2 186 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 NDRG3Q9UGV2 375 aa16.38■□□□□ 0.21
CPSF2-202ENST00000553427 SH3D21A4FU49 640 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 TRAPPC13A5PLN9 417 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 CXCR6O00574 342 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 LYPD3O95274 346 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 PPP3CBP16298 524 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 MNAT1P51948 309 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 MFSD13AQ14CX5 517 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 P2RY6Q15077 328 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 STAC2Q6ZMT1 411 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 CARM1Q86X55 608 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 RBM45Q8IUH3 476 aaKnown RBP16.37■□□□□ 0.21
CPSF2-202ENST00000553427 PGAM4Q8N0Y7 254 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 FITM2Q8N6M3 262 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 VANGL1Q8TAA9 524 aaPredicted RBP16.37■□□□□ 0.21
CPSF2-202ENST00000553427 ADAMTS16Q8TE57 1224 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 LZICQ8WZA0 190 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 MPP4Q96JB8 637 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 KCTD14Q9BQ13 255 aaPredicted RBP16.37■□□□□ 0.21
CPSF2-202ENST00000553427 ZNF426Q9BUY5 554 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 NDE1Q9NXR1 346 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 GMPR2Q9P2T1 348 aaKnown RBP16.37■□□□□ 0.21
CPSF2-202ENST00000553427 RASD1Q9Y272 281 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 GPR52Q9Y2T5 361 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 FLVCR1Q9Y5Y0 555 aa16.37■□□□□ 0.21
CPSF2-202ENST00000553427 MPDZO75970 2070 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 A6NNC1 897 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 AKR7A3O95154 331 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 SELENOWP63302 87 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 POU4F3Q15319 338 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 FXNQ16595 210 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 EXOC3L2Q2M3D2 409 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 Q6ZT83 130 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 TSPYL5Q86VY4 417 aaPredicted RBP16.36■□□□□ 0.21
CPSF2-202ENST00000553427 LSRQ86X29 649 aaPredicted RBP16.36■□□□□ 0.21
CPSF2-202ENST00000553427 TMEM99Q8N816 258 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 ADPRHL1Q8NDY3 354 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 OR9K2Q8NGE7 335 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 LINC01560Q8TB33 94 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 TMEM45BQ96B21 275 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 SLC19A3Q9BZV2 496 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 ADPRHL2Q9NX46 363 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 NOSIPQ9Y314 301 aaKnown RBP16.36■□□□□ 0.21
CPSF2-202ENST00000553427 SH3GLB1Q9Y371 365 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 CORINQ9Y5Q5 1042 aa16.36■□□□□ 0.21
CPSF2-202ENST00000553427 CPSF4LA6NMK7 179 aaKnown RBP16.35■□□□□ 0.21
CPSF2-202ENST00000553427 CTAG2O75638 210 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 OR5F1O95221 314 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 THY1P04216 161 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 THRBP10828 461 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 GGT1P19440 569 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 RPS5P46782 204 aaKnown RBP16.35■□□□□ 0.21
CPSF2-202ENST00000553427 SPATS1Q496A3 300 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 TAAR8Q969N4 342 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 APH1AQ96BI3 265 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 USB1Q9BQ65 265 aaKnown RBP16.35■□□□□ 0.21
CPSF2-202ENST00000553427 HDHD5Q9BXW7 423 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 PARPBPQ9NWS1 579 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 MALT1Q9UDY8 824 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 B3GALT5Q9Y2C3 310 aa16.35■□□□□ 0.21
CPSF2-202ENST00000553427 LOC102725191A0A1B0GVB3 256 aa16.34■□□□□ 0.21
CPSF2-202ENST00000553427 GSTA4O15217 222 aa16.34■□□□□ 0.21
CPSF2-202ENST00000553427 HSD17B1P14061 328 aa16.34■□□□□ 0.21
CPSF2-202ENST00000553427 COX5AP20674 150 aa16.34■□□□□ 0.21
CPSF2-202ENST00000553427 GTF2E2P29084 291 aaKnown RBP16.34■□□□□ 0.21
CPSF2-202ENST00000553427 SAMD4BQ5PRF9 694 aaKnown RBP16.34■□□□□ 0.21
CPSF2-202ENST00000553427 C16orf89Q6UX73 402 aa16.34■□□□□ 0.21
CPSF2-202ENST00000553427 WDR88Q6ZMY6 472 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms