RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 GMNCA6NCL1 334 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 DEFB108AA8MXU0 73 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 FXYD1O00168 92 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 NDUFAB1O14561 156 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 AKR7A3O95154 331 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 HTR2AP28223 471 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 GTF2E2P29084 291 aaKnown RBP13.58□□□□□ -0.24
SHMT2-204ENST00000553324 OR1Q1Q15612 314 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 RABL3Q5HYI8 236 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 ZNF613Q6PF04 617 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 BHLHA15Q7RTS1 189 aaPredicted RBP13.58□□□□□ -0.24
SHMT2-204ENST00000553324 TMEM99Q8N816 258 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 OR6S1Q8NH40 331 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 S100PBPQ96BU1 408 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 CMTM5Q96DZ9 223 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 ASB6Q9NWX5 421 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 ADPRHL2Q9NX46 363 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 PRSS50Q9UI38 385 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 BAG5Q9UL15 447 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 FLVCR1Q9Y5Y0 555 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 AKAP9Q99996 3911 aa13.58□□□□□ -0.24
SHMT2-204ENST00000553324 TRAV36DV7A0A075B6V5 113 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 A0A087WUJ7 227 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 OR6C65A6NJZ3 312 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 THBDP07204 575 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 COX4I1P13073 169 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 LSP1P33241 339 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 EGR4Q05215 589 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 KEAP1Q14145 624 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 POU4F3Q15319 338 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 NRF1Q16656 503 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 FAM69AQ5T7M9 428 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 GPAT4Q86UL3 456 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 OR9K2Q8NGE7 335 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 RNF217Q8TC41 542 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 TMEM45BQ96B21 275 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 MUCL1Q96DR8 90 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 PIK3IP1Q96FE7 263 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 ZNF583Q96ND8 569 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 MCHR1Q99705 422 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 ARHGDIGQ99819 225 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 UPB1Q9UBR1 384 aa13.57□□□□□ -0.24
SHMT2-204ENST00000553324 A0A0B4J2E0 115 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 A0A1B0GX12 115 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 KLF4O43474 513 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 RAMP1O60894 148 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 OPN1SWP03999 348 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 RAF1P04049 648 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 GGT1P19440 569 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 COX5AP20674 150 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 RPS5P46782 204 aaKnown RBP13.56□□□□□ -0.24
SHMT2-204ENST00000553324 IST1P53990 364 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 SEC24CP53992 1094 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 TGFBR3Q03167 851 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 TIMM23BQ5SRD1 257 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 C1QTNF12Q5T7M4 302 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 OR7E24Q6IFN5 339 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 PAMR1Q6UXH9 720 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 CASP12Q6UXS9 341 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 C22orf34Q6ZV56 151 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 ABHD12BQ7Z5M8 362 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-204ENST00000553324 COMTD1Q86VU5 262 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 GPR32P1Q8NGA4 272 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 NRGNQ92686 78 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 PROX1Q92786 737 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 TAMM41Q96BW9 452 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 SLC25A36Q96CQ1 311 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 RCN3Q96D15 328 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 MBD6Q96DN6 1003 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 KTI12Q96EK9 354 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-204ENST00000553324 FOXC2Q99958 501 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 MALT1Q9UDY8 824 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 B3GALT5Q9Y2C3 310 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 CORINQ9Y5Q5 1042 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 SPG11Q96JI7 2443 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 MYO9AB2RTY4 2548 aa13.56□□□□□ -0.24
SHMT2-204ENST00000553324 CIB4A0PJX0 185 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 ELOVL7A1L3X0 281 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 FAM220BPB1ANY3 271 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 FTCDNL1E5RQL4 147 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 AIM2O14862 343 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 SNX3O60493 162 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 TPST2O60704 377 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 FZD7O75084 574 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 LYZL6O75951 148 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 IGHV1-2P23083 117 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 NTF4P34130 210 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 CDH12P55289 794 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 FAPQ12884 760 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 H1FNTQ75WM6 255 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-204ENST00000553324 AAED1Q7RTV5 226 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 WFDC8Q8IUA0 241 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 LURAP1LQ8IV03 231 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 POU5F2Q8N7G0 328 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 ZNF433Q8N7K0 673 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-204ENST00000553324 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms