RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 UGT2B10P36537 528 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 RPS5P46782 204 aaKnown RBP16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 CRYBA2P53672 197 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 SLC16A1P53985 500 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 CDH12P55289 794 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 H3F3AP84243 136 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 ENTPD8Q5MY95 495 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 FBXW10Q5XX13 1052 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 DEF8Q6ZN54 512 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 MFSD8Q8NHS3 518 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 MED18Q9BUE0 208 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 MCCC2Q9HCC0 563 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 ARL8BQ9NVJ2 186 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 NDE1Q9NXR1 346 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 ABCD2Q9UBJ2 740 aa16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 ING1Q9UK53 422 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-216ENST00000552301 TRAV36DV7A0A075B6V5 113 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 A0A087WUJ7 227 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 TRAPPC13A5PLN9 417 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 AQP7P3A6NL99 342 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF716A6NP11 495 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF814B7Z6K7 855 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 CHP2O43745 196 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 TPST2O60704 377 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 EPXP11678 715 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 OR3A2P47893 321 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 MNAT1P51948 309 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 NPTX1Q15818 432 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 FAM69AQ5T7M9 428 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 TMEM225Q6GV28 225 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 GPAT4Q86UL3 456 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 RBM45Q8IUH3 476 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 TMEM99Q8N816 258 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 ADAMTS16Q8TE57 1224 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 FAM162AQ96A26 154 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 APH1AQ96BI3 265 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 KTI12Q96EK9 354 aaPredicted RBP16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 DACH2Q96NX9 599 aa16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 GMPR2Q9P2T1 348 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-216ENST00000552301 RAMP1O60894 148 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 MRPL33O75394 65 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 VAMP5O95183 116 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF682O95780 498 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 TNFRSF1BP20333 461 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 CCKARP32238 428 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 TAS2R41P59536 307 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 EGR4Q05215 589 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 MFSD13AQ14CX5 517 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 C16orf89Q6UX73 402 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 CASP12Q6UXS9 341 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 P3H2Q8IVL5 708 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 PGAM4Q8N0Y7 254 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 C10orf53Q8N6V4 93 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 OR4D11Q8NGI4 311 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 SF3B5Q9BWJ5 86 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 ZNF226Q9NYT6 803 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 TESMINQ9Y4I5 508 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 ADGRG4Q8IZF6 3080 aa16.4■□□□□ 0.22
PRPF40B-216ENST00000552301 FREM1Q5H8C1 2179 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 IGKV1D-42A0A075B6H8 117 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 A6NNC1 897 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 PPP3CBP16298 524 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 PTNP21246 168 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 IL32P24001 234 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 IFNA8P32881 189 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 IL1RL1Q01638 556 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 KRT72Q14CN4 511 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 STAC2Q6ZMT1 411 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 UBE2J2Q8N2K1 259 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 OR9K2Q8NGE7 335 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 MPP4Q96JB8 637 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 TMEM43Q9BTV4 400 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 PTDSS2Q9BVG9 487 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 POLR2J2Q9GZM3 115 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 PCDHAC1Q9H158 963 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 POLR2J3Q9H1A7 115 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 PARPBPQ9NWS1 579 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 SLC7A7Q9UM01 511 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 RASD1Q9Y272 281 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 GPR52Q9Y2T5 361 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 FLVCR1Q9Y5Y0 555 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 ABCA12Q86UK0 2595 aa16.39■□□□□ 0.21
PRPF40B-216ENST00000552301 FTCDNL1E5RQL4 147 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 PSMB1P20618 241 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 OR1E2P47887 323 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 SELENOWP63302 87 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 SLC17A1Q14916 467 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 P2RY6Q15077 328 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 SAMD4BQ5PRF9 694 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 ANKRD34AQ69YU3 496 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 TTC33Q6PID6 262 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 Q6ZT83 130 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 CXorf67Q86X51 503 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 GABRG1Q8N1C3 465 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 FITM2Q8N6M3 262 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 STEAP2Q8NFT2 490 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 TAAR8Q969N4 342 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 SLC41A3Q96GZ6 507 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 ZC3HAV1LQ96H79 300 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms