RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ZNF141Q15928 474 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 IQCCQ4KMZ1 466 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 GPAT3Q53EU6 434 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 CYB5R2Q6BCY4 276 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 C3orf33Q6P1S2 294 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 EMBQ6PCB8 327 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 TMEM108Q6UXF1 575 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 FRRS1Q6ZNA5 592 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF771Q7L3S4 317 aaPredicted RBP5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 C16orf62Q7Z3J2 963 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 MTERF4Q7Z6M4 381 aaKnown RBP5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 MTDHQ86UE4 582 aaKnown RBP5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 WDFY1Q8IWB7 410 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 ZIC4Q8N9L1 334 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 MNS1Q8NEH6 495 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 OR56A1Q8NGH5 318 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 TCP10LQ8TDR4 215 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 ROPN1LQ96C74 230 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 AURKBQ96GD4 344 aaPredicted RBP5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 Q96M66 194 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 OR10A4Q9H209 315 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 TPK1Q9H3S4 243 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 LPAR2Q9HBW0 351 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 FANCFQ9NPI8 374 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC17A5Q9NRA2 495 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC6A13Q9NSD5 602 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 CHRNA9Q9UGM1 479 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 OSGIN1Q9UJX0 560 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 WBP11Q9Y2W2 641 aaKnown RBP5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 TMED7Q9Y3B3 224 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 FLVCR1Q9Y5Y0 555 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 TGP01266 2768 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 MGAM2Q2M2H8 2515 aa5.96□□□□□ -1.46
PRPF40B-214ENST00000551320 IGHV1-18A0A0C4DH31 117 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 PDLIM1O00151 329 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 WNT9BO14905 357 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SCN2BO60939 215 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 STX11O75558 287 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 UPK3AO75631 287 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 CHEK2O96017 543 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 TGFAP01135 160 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 IGFBP1P08833 259 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 DHRS4L1P0CG22 281 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 NEFHP12036 1026 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SRD5A1P18405 259 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 TCN1P20061 433 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 CBLP22681 906 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 TACR3P29371 465 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 IL12AP29459 219 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SELENOPP49908 381 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 EFNA4P52798 201 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SUMO3P55854 103 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 LOXL1Q08397 574 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 CEACAM7Q14002 265 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 OR7A5Q15622 319 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 ETFDHQ16134 617 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 MSMPQ1L6U9 139 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 CR1LQ2VPA4 569 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 ARHGAP11BQ3KRB8 267 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 GTDC1Q4AE62 458 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SPANXN4Q5MJ08 99 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 ZCCHC12Q6PEW1 402 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 EIF3MQ7L2H7 374 aaKnown RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC46A3Q7Z3Q1 461 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 R3HCC1LQ7Z5L2 792 aaKnown RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 GPAT4Q86UL3 456 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 LCA5Q86VQ0 697 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 RNF130Q86XS8 419 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 VRK2Q86Y07 508 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SVOPLQ8N434 492 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 MFSD4AQ8N468 514 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF781Q8N8C0 355 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 PSMA8Q8TAA3 256 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SFXN5Q8TD22 340 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 APOPT1Q96IL0 206 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 PPP3R2Q96LZ3 170 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 MUS81Q96NY9 551 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 ALKBH3Q96Q83 286 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 SNX18Q96RF0 628 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 RSPO3Q9BXY4 272 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 BPESC1Q9GZL8 116 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF350Q9GZX5 532 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 HOXD1Q9GZZ0 328 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 BARX1Q9HBU1 254 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 FAIMQ9NVQ4 179 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 PNPOQ9NVS9 261 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 ADPRHL2Q9NX46 363 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 UPB1Q9UBR1 384 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 CDC42EP3Q9UKI2 254 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 FZR1Q9UM11 496 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 WDR45Q9Y484 360 aa5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 V9GYY5 206 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-214ENST00000551320 CMYA5Q8N3K9 4069 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 IGKV3D-15A0A087WSY6 115 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 VWC2LB2RUY7 222 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 TMEM114B3SHH9 223 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 KIF2AO00139 706 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 ETV2O00321 342 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 HMGN4O00479 90 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms