RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 SF3B5Q9BWJ5 86 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-211ENST00000551063 KLHL4Q9C0H6 718 aa13.68□□□□□ -0.22
PRPF40B-211ENST00000551063 ZNF226Q9NYT6 803 aa13.68□□□□□ -0.22
PRPF40B-211ENST00000551063 BAG5Q9UL15 447 aa13.68□□□□□ -0.22
PRPF40B-211ENST00000551063 SLC9A8Q9Y2E8 581 aa13.68□□□□□ -0.22
PRPF40B-211ENST00000551063 A0A087WUJ7 227 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 CASKO14936 926 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 OR2T1O43869 369 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 VAMP5O95183 116 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 SLC17A1Q14916 467 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 P2RY6Q15077 328 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 NPTX1Q15818 432 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 FAM69AQ5T7M9 428 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 CCDC103Q8IW40 242 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 STEAP2Q8NFT2 490 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 OR6S1Q8NH40 331 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 PROX1Q92786 737 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 EPYCQ99645 322 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 MCHR1Q99705 422 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 PRR14Q9BWN1 585 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 HDHD5Q9BXW7 423 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 PCDHAC1Q9H158 963 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 CLEC4MQ9H2X3 399 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 USP22Q9UPT9 525 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 NOSIPQ9Y314 301 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 FLVCR1Q9Y5Y0 555 aa13.67□□□□□ -0.22
PRPF40B-211ENST00000551063 IGKV1D-42A0A075B6H8 117 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 TRAV36DV7A0A075B6V5 113 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 CHP2O43745 196 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 DCTN3O75935 186 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 AKR7A3O95154 331 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 HRGP04196 525 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 CRYGSP22914 178 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 P2RY4P51582 365 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 CDH12P55289 794 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 RIPPLY3P57055 190 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 LIPEQ05469 1076 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 MFSD13AQ14CX5 517 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 Q6ZT83 130 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 LSRQ86X29 649 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 ZNF100Q8IYN0 542 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 TMEM99Q8N816 258 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 OR4D11Q8NGI4 311 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 VANGL1Q8TAA9 524 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 TMEM45BQ96B21 275 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 APH1AQ96BI3 265 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 WFIKKN1Q96NZ8 548 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 USB1Q9BQ65 265 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 POLDIP3Q9BY77 421 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 ALG2Q9H553 416 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 ADPRHL2Q9NX46 363 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 ABCD2Q9UBJ2 740 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 RASD1Q9Y272 281 aa13.66□□□□□ -0.22
PRPF40B-211ENST00000551063 NME4O00746 187 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 MRPL33O75394 65 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 COX5AP20674 150 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 IL32P24001 234 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 KDELR2P33947 212 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 RPS5P46782 204 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 PSME3P61289 254 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 ITGADQ13349 1161 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 POU4F3Q15319 338 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 LRRC23Q53EV4 343 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 CYBRD1Q53TN4 286 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 ENTPD8Q5MY95 495 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 SFRP5Q5T4F7 317 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 CXorf67Q86X51 503 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 RBM45Q8IUH3 476 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 ANKS4BQ8N8V4 417 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 OR9K2Q8NGE7 335 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 KISS1RQ969F8 398 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 ZNF775Q96BV0 537 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 KTI12Q96EK9 354 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 MPP4Q96JB8 637 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 LRRC37BQ96QE4 947 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 TMEM43Q9BTV4 400 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 POLR2J2Q9GZM3 115 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 ACTR6Q9GZN1 396 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 POLR2J3Q9H1A7 115 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 SPAG4Q9NPE6 437 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 PARPBPQ9NWS1 579 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 PRSS50Q9UI38 385 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 SPG11Q96JI7 2443 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 TEP1Q99973 2627 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 ABCA4P78363 2273 aa13.65□□□□□ -0.22
PRPF40B-211ENST00000551063 TRAPPC13A5PLN9 417 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 CPSF4LA6NMK7 179 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 ADAP00813 363 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 EDNRAP25101 427 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 GSK3BP49841 420 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 TESK1Q15569 626 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 FBXW9Q5XUX1 488 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 FBXW10Q5XX13 1052 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 TMEM225Q6GV28 225 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 CASP12Q6UXS9 341 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 SPNS3Q6ZMD2 512 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 CARM1Q86X55 608 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 ADPRHL1Q8NDY3 354 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms