RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SPOCK3Q9BQ16 436 aa17.24■□□□□ 0.35
DDX54-207ENST00000550016 PTDSS2Q9BVG9 487 aa17.24■□□□□ 0.35
DDX54-207ENST00000550016 RBM24Q9BX46 236 aaKnown RBP17.24■□□□□ 0.35
DDX54-207ENST00000550016 DCAF13Q9NV06 445 aaKnown RBP17.24■□□□□ 0.35
DDX54-207ENST00000550016 TAS2R1Q9NYW7 299 aa17.24■□□□□ 0.35
DDX54-207ENST00000550016 MAGEL2Q9UJ55 1249 aa17.24■□□□□ 0.35
DDX54-207ENST00000550016 ING1Q9UK53 422 aaPredicted RBP17.24■□□□□ 0.35
DDX54-207ENST00000550016 SLC7A7Q9UM01 511 aa17.24■□□□□ 0.35
DDX54-207ENST00000550016 TRAV36DV7A0A075B6V5 113 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 IGKV3D-15A0A087WSY6 115 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 ZNF724A8MTY0 619 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 ZNF814B7Z6K7 855 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 AKR7A3O95154 331 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 THY1P04216 161 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 IGFBP2P18065 325 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 UQCRC1P31930 480 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 TAS2R41P59536 307 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 OTUD3Q5T2D3 398 aaPredicted RBP17.23■□□□□ 0.35
DDX54-207ENST00000550016 GDF7Q7Z4P5 450 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 P3H2Q8IVL5 708 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 ZNF610Q8N9Z0 462 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 TAAR8Q969N4 342 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 SLC25A36Q96CQ1 311 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 SLC41A3Q96GZ6 507 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 MPP4Q96JB8 637 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 HSH2DQ96JZ2 352 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 EPYCQ99645 322 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 OPN3Q9H1Y3 402 aaPredicted RBP17.23■□□□□ 0.35
DDX54-207ENST00000550016 EMC3Q9P0I2 261 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 RIMS3Q9UJD0 308 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 SNX13Q9Y5W8 968 aa17.23■□□□□ 0.35
DDX54-207ENST00000550016 ZNF716A6NP11 495 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 FTCDNL1E5RQL4 147 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 GPR171O14626 319 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 RAMP1O60894 148 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 OR5F1O95221 314 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 IFNW1P05000 195 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 COX6B1P14854 86 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 SLC16A1P53985 500 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 PIN1Q13526 163 aaPredicted RBP17.22■□□□□ 0.35
DDX54-207ENST00000550016 FAM69AQ5T7M9 428 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 TTC33Q6PID6 262 aaPredicted RBP17.22■□□□□ 0.35
DDX54-207ENST00000550016 ZNF474Q6S9Z5 364 aaPredicted RBP17.22■□□□□ 0.35
DDX54-207ENST00000550016 MEX3BQ6ZN04 569 aaKnown RBP17.22■□□□□ 0.35
DDX54-207ENST00000550016 NUFIP2Q7Z417 695 aaKnown RBP17.22■□□□□ 0.35
DDX54-207ENST00000550016 KIF18BQ86Y91 864 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 TMEM99Q8N816 258 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 OR6S1Q8NH40 331 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 ZNF300Q96RE9 604 aaPredicted RBP17.22■□□□□ 0.35
DDX54-207ENST00000550016 AMBRA1Q9C0C7 1298 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 C12orf49Q9H741 205 aa17.22■□□□□ 0.35
DDX54-207ENST00000550016 PRPF19Q9UMS4 504 aaKnown RBP17.22■□□□□ 0.35
DDX54-207ENST00000550016 SAMD4AQ9UPU9 718 aaKnown RBP17.22■□□□□ 0.35
DDX54-207ENST00000550016 AQP7P3A6NL99 342 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 ARPC2O15144 300 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 FZD7O75084 574 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 THRBP10828 461 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 IFNA8P32881 189 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 MFSD13AQ14CX5 517 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 TMEM225Q6GV28 225 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 WDR88Q6ZMY6 472 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 STK32CQ86UX6 486 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 DMRTC2Q8IXT2 367 aaPredicted RBP17.21■□□□□ 0.35
DDX54-207ENST00000550016 ZNF775Q96BV0 537 aaPredicted RBP17.21■□□□□ 0.35
DDX54-207ENST00000550016 PRSS27Q9BQR3 290 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 GALNT8Q9NY28 637 aa17.21■□□□□ 0.35
DDX54-207ENST00000550016 CACNA1DQ01668 2161 aa17.21■□□□□ 0.34
DDX54-207ENST00000550016 CENPEQ02224 2701 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 CRYBG3Q68DQ2 2970 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 PTNP21246 168 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 GTF2E2P29084 291 aaKnown RBP17.2■□□□□ 0.34
DDX54-207ENST00000550016 PEX19P40855 299 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 PCYT1AP49585 367 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 SLC17A1Q14916 467 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 ZNF787Q6DD87 383 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 GALNT5Q7Z7M9 940 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 PRRC1Q96M27 445 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 NSMCE2Q96MF7 247 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 ZNF426Q9BUY5 554 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 SF3B5Q9BWJ5 86 aaKnown RBP17.2■□□□□ 0.34
DDX54-207ENST00000550016 SLC19A3Q9BZV2 496 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 ELOVL5Q9NYP7 299 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 A4GNTQ9UNA3 340 aa17.2■□□□□ 0.34
DDX54-207ENST00000550016 ADGRG4Q8IZF6 3080 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 GYG2O15488 501 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 HNRNPRO43390 633 aaKnown RBP17.19■□□□□ 0.34
DDX54-207ENST00000550016 VAMP5O95183 116 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 BGLAPP02818 100 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 RBM34P42696 430 aaKnown RBP17.19■□□□□ 0.34
DDX54-207ENST00000550016 P2RY4P51582 365 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 SORDQ00796 357 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 ST3GAL3Q11203 375 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 BEND4Q6ZU67 534 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 C10orf53Q8N6V4 93 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 PYURFQ96I23 114 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 HS6ST2Q96MM7 605 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 MUC13Q9H3R2 512 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 SLC24A3Q9HC58 644 aa17.19■□□□□ 0.34
DDX54-207ENST00000550016 C6orf203Q9P0P8 240 aaPredicted RBP17.19■□□□□ 0.34
DDX54-207ENST00000550016 ACTR3BQ9P1U1 418 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms