RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 KLF11O14901 512 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 VAMP5O95183 116 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 DBIP07108 87 aaKnown RBP11.84□□□□□ -0.51
TROAP-211ENST00000549891 ERCC1P07992 297 aaPredicted RBP11.84□□□□□ -0.51
TROAP-211ENST00000549891 S100A3P33764 101 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 UBE2NP61088 152 aaKnown RBP11.84□□□□□ -0.51
TROAP-211ENST00000549891 PLAURQ03405 335 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 LRRC74AQ0VAA2 488 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 CEACAM7Q14002 265 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 OR7A5Q15622 319 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 CARTPTQ16568 116 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 HIKESHIQ53FT3 197 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 SPANXN4Q5MJ08 99 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 TMEM225Q6GV28 225 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 LRRC74BQ6ZQY2 392 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 RNF130Q86XS8 419 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 C3orf49Q96BT1 292 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 AURKBQ96GD4 344 aaPredicted RBP11.84□□□□□ -0.51
TROAP-211ENST00000549891 PRR14Q9BWN1 585 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 RAB1BQ9H0U4 201 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 SLC38A1Q9H2H9 487 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 CA10Q9NS85 328 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 BTNL2Q9UIR0 455 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.84□□□□□ -0.51
TROAP-211ENST00000549891 NBEAL1Q6ZS30 2694 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 IGHV1-18A0A0C4DH31 117 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ZC3H12DA2A288 527 aaKnown RBP11.83□□□□□ -0.52
TROAP-211ENST00000549891 PRAMEF27A3QJZ7 478 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 LIPT2A6NK58 231 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 AQP7P3A6NL99 342 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 VSTM5A8MXK1 200 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 AKR7A3O95154 331 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 TGFAP01135 160 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 SERPINE1P05121 402 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 NR2F1P10589 423 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ZNF23P17027 643 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 LBPP18428 481 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ETV4P43268 484 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 PPOXP50336 477 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ABCE1P61221 599 aaKnown RBP11.83□□□□□ -0.52
TROAP-211ENST00000549891 COPZ1P61923 177 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 EPS8Q12929 822 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 SYPL1Q16563 259 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 C3orf36Q3SXR2 165 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 TBRG1Q3YBR2 411 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 FAM174BQ3ZCQ3 159 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 MRPL2Q5T653 305 aaKnown RBP11.83□□□□□ -0.52
TROAP-211ENST00000549891 IL17RELQ6ZVW7 336 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 SPATA19Q7Z5L4 167 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 PEX5LQ8IYB4 626 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 TMEM99Q8N816 258 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ZNF781Q8N8C0 355 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ANKFN1Q8N957 763 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ZIC4Q8N9L1 334 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 OR1K1Q8NGR3 316 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 CCDC115Q96NT0 180 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 FOXN4Q96NZ1 517 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ZNF385AQ96PM9 386 aaKnown RBP11.83□□□□□ -0.52
TROAP-211ENST00000549891 PANX1Q96RD7 426 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ADAM19Q9H013 955 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 RAP2CQ9Y3L5 183 aa11.83□□□□□ -0.52
TROAP-211ENST00000549891 ARPC4-TTLL3A0A0A6YYG9 625 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 IGHV4-61A0A0C4DH41 118 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 SLC35F4A4IF30 521 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 TYROBPO43914 113 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 CHRM4P08173 479 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 OR4A8P0C604 315 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 HOXB1P14653 301 aaPredicted RBP11.82□□□□□ -0.52
TROAP-211ENST00000549891 RPS4Y1P22090 263 aaKnown RBP11.82□□□□□ -0.52
TROAP-211ENST00000549891 RPL14P50914 215 aaKnown RBP11.82□□□□□ -0.52
TROAP-211ENST00000549891 SH3BGRP55822 239 aaPredicted RBP11.82□□□□□ -0.52
TROAP-211ENST00000549891 EFNB3Q15768 340 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 CHI3L2Q15782 390 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 WBP2NLQ6ICG8 309 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 ANKS4BQ8N8V4 417 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 OR4F15Q8NGB8 312 aa11.82□□□□□ -0.52
TROAP-211ENST00000549891 MAGEE2Q8TD90 523 aaPredicted RBP11.82□□□□□ -0.52
TROAP-211ENST00000549891 A0A096LPI6 279 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 CDHR4A6H8M9 788 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 CCDC154A6NI56 674 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 A8MVM7 634 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 BIRC5O15392 142 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 ITM2AO43736 263 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 KRT75O95678 551 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 LGI1O95970 557 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 PGRP06401 933 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 CREB1P16220 341 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 IDH3GP51553 393 aaPredicted RBP11.81□□□□□ -0.52
TROAP-211ENST00000549891 NAAAQ02083 359 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 ADIPOQQ15848 244 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 ZSWIM7Q19AV6 140 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 LIN52Q52LA3 116 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 ANKRD16Q6P6B7 361 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 ZNF621Q6ZSS3 439 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 CREB3L2Q70SY1 520 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 CADM2Q8N3J6 435 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 FAM169BQ8N8A8 192 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 PKNOX2Q96KN3 472 aa11.81□□□□□ -0.52
TROAP-211ENST00000549891 ALKBH3Q96Q83 286 aaPredicted RBP11.81□□□□□ -0.52
TROAP-211ENST00000549891 LINC00470Q9BZP3 86 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms