RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 E7EQL1 145 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 ABCD4O14678 606 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 POLR3GO15318 223 aaPredicted RBP10.69□□□□□ -0.7
DDX54-206ENST00000549271 DNPH1O43598 174 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 LYZL6O75951 148 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 TGFAP01135 160 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 TFPTP0C1Z6 253 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 NR2F1P10589 423 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 ETFAP13804 333 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 GGT1P19440 569 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 PGCP20142 388 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 IGHV1-2P23083 117 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 EDNRAP25101 427 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 FKBP2P26885 142 aaKnown RBP10.69□□□□□ -0.7
DDX54-206ENST00000549271 NR4A2P43354 598 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 EFNA4P52798 201 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 CSNK2A1P68400 391 aaPredicted RBP10.69□□□□□ -0.7
DDX54-206ENST00000549271 GGTLC2Q14390 218 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 ABLIM2Q6H8Q1 611 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 SLC2A7Q6PXP3 512 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 BLOC1S3Q6QNY0 202 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 ZNF433Q8N7K0 673 aaPredicted RBP10.69□□□□□ -0.7
DDX54-206ENST00000549271 DYDC1Q8WWB3 177 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 TMEM234Q8WY98 164 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 PMM1Q92871 262 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 MAGEB18Q96M61 343 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 OR5B2Q96R09 309 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 ZNF300Q96RE9 604 aaPredicted RBP10.69□□□□□ -0.7
DDX54-206ENST00000549271 RMND5AQ9H871 391 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 EXOSC3Q9NQT5 275 aaKnown RBP10.69□□□□□ -0.7
DDX54-206ENST00000549271 SERINC1Q9NRX5 453 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 PCDHB14Q9Y5E9 798 aa10.69□□□□□ -0.7
DDX54-206ENST00000549271 ANP32DO95626 131 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 APEHP13798 732 aaKnown RBP10.68□□□□□ -0.7
DDX54-206ENST00000549271 RYKP34925 604 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 APOBEC1P41238 236 aaKnown RBP10.68□□□□□ -0.7
DDX54-206ENST00000549271 CRATP43155 626 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 CLK1P49759 484 aaKnown RBP10.68□□□□□ -0.7
DDX54-206ENST00000549271 DIO1P49895 249 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 ANXA11P50995 505 aaKnown RBP10.68□□□□□ -0.7
DDX54-206ENST00000549271 MERTKQ12866 999 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 STK11Q15831 433 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 SYT14P1Q58G82 188 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 C1QTNF12Q5T7M4 302 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 FBXW9Q5XUX1 488 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 MTDHQ86UE4 582 aaKnown RBP10.68□□□□□ -0.7
DDX54-206ENST00000549271 LSRQ86X29 649 aaPredicted RBP10.68□□□□□ -0.7
DDX54-206ENST00000549271 ADGRG3Q86Y34 549 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 MSRB3Q8IXL7 192 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 MUC15Q8N387 334 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 ARFGAP2Q8N6H7 521 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 GOLGA6L1Q8N7Z2 621 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 SLC38A5Q8WUX1 472 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 DHRS9Q9BPW9 319 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 SOX7Q9BT81 388 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 CCDC106Q9BWC9 280 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 CTPS2Q9NRF8 586 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 NPAP1Q9NZP6 1156 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 EMC3Q9P0I2 261 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 SLAMF8Q9P0V8 285 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 MGAT4BQ9UQ53 548 aa10.68□□□□□ -0.7
DDX54-206ENST00000549271 SPIN1Q9Y657 262 aaPredicted RBP10.68□□□□□ -0.7
DDX54-206ENST00000549271 DSPPQ9NZW4 1301 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 A0A096LPI6 279 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 IGHV4-61A0A0C4DH41 118 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 ZNF716A6NP11 495 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 SULT2B1O00204 365 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 NDUFS8O00217 210 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 CLIC1O00299 241 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 AP3D1O14617 1153 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 GPR171O14626 319 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 LY6HO94772 140 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 PMS2P2O95744 297 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 NUDT7P0C024 238 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 PTAFRP25105 342 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 IDH2P48735 452 aaKnown RBP10.67□□□□□ -0.7
DDX54-206ENST00000549271 ATP4BP51164 291 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 SLC16A1P53985 500 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 DSTNP60981 165 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 STX1BP61266 288 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 ACTG1P63261 375 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 HPCAP84074 193 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 RGNQ15493 299 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 PAGE3Q5JUK9 113 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 C6orf10Q5SRN2 563 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 TMEM108Q6UXF1 575 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 VRK2Q86Y07 508 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 CMIPQ8IY22 773 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 ZNF100Q8IYN0 542 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 STON2Q8WXE9 905 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 ZNF775Q96BV0 537 aaPredicted RBP10.67□□□□□ -0.7
DDX54-206ENST00000549271 SPDL1Q96EA4 605 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 THOC1Q96FV9 657 aaKnown RBP10.67□□□□□ -0.7
DDX54-206ENST00000549271 MUS81Q96NY9 551 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 RSPO3Q9BXY4 272 aaPredicted RBP10.67□□□□□ -0.7
DDX54-206ENST00000549271 ZNF696Q9H7X3 374 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 RLIMQ9NVW2 624 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 ZNF446Q9NWS9 450 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 SLC25A37Q9NYZ2 338 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 CCDC167Q9P0B6 97 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms