RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 DUSP5Q16690 384 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TIMM50Q3ZCQ8 353 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 GUSBP11Q6P575 273 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TUBA1AQ71U36 451 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 SLC16A14Q7RTX9 510 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 STK32CQ86UX6 486 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 RANBP3LQ86VV4 465 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CCDC71Q8IV32 467 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ASB10Q8WXI3 467 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 Q9H521 79 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 MCCC2Q9HCC0 563 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 STARD5Q9NSY2 213 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 AP5S1Q9NUS5 200 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 C3orf18Q9UK00 162 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 IQCMA0A1B0GVH7 501 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF716A6NP11 495 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 NPIPB11E5RHQ5 1161 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 H3BQ06 376 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 GPRIN2O60269 458 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 MT-ND1P03886 318 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TK1P04183 234 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ALPPP05187 535 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CYP4B1P13584 511 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 COX7A2P14406 83 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CLDN2P57739 230 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 RPL11P62913 178 aaKnown RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ADORA2A-AS1P86434 159 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 FLYWCH1Q4VC44 716 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ARHGAP11AQ6P4F7 1023 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CBLN3Q6UW01 205 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF554Q86TJ5 538 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TPRA1Q86W33 373 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 DEFB107AQ8IZN7 70 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 OR7A2PQ8NGA2 310 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CCL4L1Q8NHW4 92 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 RNF128Q8TEB7 428 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 HMGB4Q8WW32 186 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 LZICQ8WZA0 190 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 C8orf44Q96CB5 159 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TMEM19Q96HH6 336 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 Q96MT0 163 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 F2RL3Q96RI0 385 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 FAM173AQ9BQD7 235 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 NUDT9Q9BW91 350 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 RGCCQ9H4X1 137 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 PNRC2Q9NPJ4 139 aaKnown RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 PPANQ9NQ55 473 aaKnown RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TBC1D23Q9NUY8 699 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 FLRT3Q9NZU0 649 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 B3GAT1Q9P2W7 334 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 BLOC1S6Q9UL45 172 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 RNF103-CHMP3A0A140T963 221 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 LIPT2A6NK58 231 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 NOS1APO75052 506 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CBR3O75828 277 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ACTL6BO94805 426 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TGM6O95932 706 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CDK1P06493 297 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 PIRTP0C851 137 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CERS1P27544 350 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 NUDT6P53370 316 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 SNRPNP63162 240 aaKnown RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 C6orf163Q5TEZ5 329 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ZCCHC23Q6ZST2 131 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 GDF7Q7Z4P5 450 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 NANOGP1Q8N7R0 232 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 OR8J1Q8NGP2 316 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TSACCQ96A04 125 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 Q9N2J8 555 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ELOVL5Q9NYP7 299 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 SLC23A1Q9UHI7 598 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 RAB23Q9ULC3 237 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 FOXJ3Q9UPW0 622 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 A8MVM7 634 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 STMND1H3BQB6 276 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 PGRMC2O15173 223 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 HCRTR1O43613 425 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 OR1F1O43749 312 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SSX4O60224 188 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 GATBO75879 557 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 NEURL1O76050 574 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 PDE5AO76074 875 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TNFAIP8O95379 198 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 C6orf47O95873 294 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SCGB1D1O95968 90 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 RPLP0P05388 317 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 HTR1AP08908 422 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CST2P09228 141 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF12P17014 697 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CPN2P22792 545 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CRYGSP22914 178 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SDHAP31040 664 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CRYZQ08257 329 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CDK5R1Q15078 307 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TGIF1Q15583 401 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 KIAA1324Q6UXG2 1013 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 GALNT4Q8N4A0 578 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 WDSUB1Q8N9V3 476 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 NUP37Q8NFH4 326 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 OR6K2Q8NGY2 324 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms