RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 DPRXA6NFQ7 191 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 OR6C65A6NJZ3 312 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 AQP7P3A6NL99 342 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 OR2T1O43869 369 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 RAD51DO75771 328 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 AHSA1O95433 338 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 IGHV3-9P01782 118 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 ARAFP10398 606 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 HOXB9P17482 250 aaPredicted RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 SLC6A2P23975 617 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 EDNRAP25101 427 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 PTAFRP25105 342 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 CDK6Q00534 326 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 OR7A5Q15622 319 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 ZNF672Q499Z4 452 aaPredicted RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 SWT1Q5T5J6 900 aaKnown RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 C1orf140Q5VVS0 124 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 METTL21CQ5VZV1 264 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 CASP12Q6UXS9 341 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 SERPINA11Q86U17 422 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 GPAT4Q86UL3 456 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 DEPDC4Q8N2C3 294 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 C17orf78Q8N4C9 275 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 LSMEM1Q8N8F7 131 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 POMGNT2Q8NAT1 580 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 C1orf162Q8NEQ5 155 aaPredicted RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 MFSD8Q8NHS3 518 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 TSPEARQ8WU66 669 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 SMAP2Q8WU79 429 aaPredicted RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 DNAJA4Q8WW22 397 aaPredicted RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 GTPBP3Q969Y2 492 aaKnown RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 DNAJA3Q96EY1 480 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 ZNF607Q96SK3 696 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 GRIP2Q9C0E4 1043 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 TMEM38AQ9H6F2 299 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 SLC52A3Q9NQ40 469 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 ADPRHL2Q9NX46 363 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 VAPAQ9P0L0 249 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 SLAMF8Q9P0V8 285 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 DCTN4Q9UJW0 460 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 SLC13A4Q9UKG4 626 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 NDUFAF1Q9Y375 327 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 MAGED1Q9Y5V3 778 aaPredicted RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 ACANP16112 2415 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 ELOA3DA6NLF2 546 aaPredicted RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 ANGPT2O15123 496 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 RAMP1O60894 148 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 NPIPB7O75200 414 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 AKR7A3O95154 331 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 PNMTP11086 282 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 PRG2P13727 222 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 H2AFXP16104 143 aaPredicted RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 GTF2E2P29084 291 aaKnown RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 MPGP29372 298 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 NTF4P34130 210 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 ATP5J2P56134 94 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 GABRA6Q16445 453 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 ELOA3BQ3SY89 546 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 PAGE3Q5JUK9 113 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 PRR14LQ5THK1 2151 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 SEZ6L2Q6UXD5 910 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 AAED1Q7RTV5 226 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 NET1Q7Z628 596 aaPredicted RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 ATG4DQ86TL0 474 aaPredicted RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 TMEM99Q8N816 258 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 ELOA3Q8NG57 546 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 OR9K2Q8NGE7 335 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 LILRB1Q8NHL6 650 aaPredicted RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 C3orf49Q96BT1 292 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 Q96MF0 132 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 TRIM2Q9C040 744 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 ALG2Q9H553 416 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 CISD1Q9NZ45 108 aaKnown RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 SELENONQ9NZV5 590 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 LEF1Q9UJU2 399 aaPredicted RBP10.03□□□□□ -0.8
BEST3-209ENST00000548658 RASD1Q9Y272 281 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 AMDHD2Q9Y303 409 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 CHST2Q9Y4C5 530 aa10.03□□□□□ -0.8
BEST3-209ENST00000548658 ZNF469Q96JG9 3925 aaPredicted RBP10.02□□□□□ -0.81
BEST3-209ENST00000548658 TRBV5-3A0A0A0MS03 114 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 PDLIM1O00151 329 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 ABCD4O14678 606 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 FRS3O43559 492 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 KRT33AO76009 404 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 DANCRP0C864 163 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 PRPS1P60891 318 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 NCALDP61601 193 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 RBBP4Q09028 425 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 BNIP2Q12982 314 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 SCARB2Q14108 478 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 MFSD13AQ14CX5 517 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 FAM91A1Q658Y4 838 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 ULK3Q6PHR2 472 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 DHRS4L2Q6PKH6 230 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 KLHL24Q6TFL4 600 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 C6orf89Q6UWU4 347 aa10.02□□□□□ -0.81
BEST3-209ENST00000548658 CLEC9AQ6UXN8 241 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms