RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 DEPDC4Q8N2C3 294 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 SLC7A6OSQ96CW6 309 aaPredicted RBP14.39□□□□□ -0.11
SSH1-208ENST00000548522 ZHX1-C8orf76Q96EF9 292 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 SOX7Q9BT81 388 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 ZDHHC2Q9UIJ5 367 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 MOKQ9UQ07 419 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 FLVCR1Q9Y5Y0 555 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 SPIN1Q9Y657 262 aaPredicted RBP14.39□□□□□ -0.11
SSH1-208ENST00000548522 LOC100289279A0A1B0GTE1 492 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 PRAMEF27A3QJZ7 478 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 GPR171O14626 319 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 ITM2AO43736 263 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 AK1P00568 194 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 CSF3P09919 207 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 IMPDH2P12268 514 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 PRDX6P30041 224 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 APOBEC3AP31941 199 aaPredicted RBP14.38□□□□□ -0.11
SSH1-208ENST00000548522 NR4A2P43354 598 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 GZMKP49863 264 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 MNAT1P51948 309 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 PHC1P78364 1004 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 ELF3P78545 371 aaPredicted RBP14.38□□□□□ -0.11
SSH1-208ENST00000548522 H3F3AP84243 136 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 CARTPTQ16568 116 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 SWI5Q1ZZU3 235 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 HIKESHIQ53FT3 197 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 OR7E24Q6IFN5 339 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 FAM166AQ6J272 317 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 ANKRD46Q86W74 232 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 C1orf21Q9H246 121 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 KCNS2Q9ULS6 477 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 HDGFL3Q9Y3E1 203 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 WDR45Q9Y484 360 aa14.38□□□□□ -0.11
SSH1-208ENST00000548522 TMEM72A0PK05 275 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 ZC3H12DA2A288 527 aaKnown RBP14.37□□□□□ -0.11
SSH1-208ENST00000548522 DUXAA6NLW8 204 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 CDH2P19022 906 aaPredicted RBP14.37□□□□□ -0.11
SSH1-208ENST00000548522 MAGEA8P43361 318 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 CHRNB3Q05901 458 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 SF3A3Q12874 501 aaKnown RBP eCLIP14.37□□□□□ -0.11
SSH1-208ENST00000548522 BHLHB9Q6PI77 547 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 EPGNQ6UW88 154 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 HOMEZQ8IX15 550 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 C17orf78Q8N4C9 275 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 NATD1Q8N6N6 113 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 OR4A15Q8NGL6 344 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 XAGE5Q8WWM1 108 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 CNOT9Q92600 299 aaKnown RBP14.37□□□□□ -0.11
SSH1-208ENST00000548522 TUBGCP3Q96CW5 907 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 THOC1Q96FV9 657 aaKnown RBP14.37□□□□□ -0.11
SSH1-208ENST00000548522 PRPF18Q99633 342 aaKnown RBP14.37□□□□□ -0.11
SSH1-208ENST00000548522 CCDC28BQ9BUN5 200 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 FKRPQ9H9S5 495 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 UPB1Q9UBR1 384 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 SLC35A3Q9Y2D2 325 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 AMDHD2Q9Y303 409 aa14.37□□□□□ -0.11
SSH1-208ENST00000548522 ARFGEF3Q5TH69 2177 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 HDAC3O15379 428 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 DNPH1O43598 174 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 APEHP13798 732 aaKnown RBP14.36□□□□□ -0.11
SSH1-208ENST00000548522 THBS2P35442 1172 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 IDH2P48735 452 aaKnown RBP14.36□□□□□ -0.11
SSH1-208ENST00000548522 PDLIM4P50479 330 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 RPL14P50914 215 aaKnown RBP14.36□□□□□ -0.11
SSH1-208ENST00000548522 LGALS3BPQ08380 585 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 SLC17A1Q14916 467 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 ARHGAP24Q8N264 748 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 C1orf162Q8NEQ5 155 aaPredicted RBP14.36□□□□□ -0.11
SSH1-208ENST00000548522 MIPOL1Q8TD10 442 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 ROPN1LQ96C74 230 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 C1orf159Q96HA4 380 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 PPP1R36Q96LQ0 422 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 FOXN4Q96NZ1 517 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 ZNF385AQ96PM9 386 aaKnown RBP14.36□□□□□ -0.11
SSH1-208ENST00000548522 PIMREGQ9BSJ6 248 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 EXD2Q9NVH0 621 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 TMEM181Q9P2C4 612 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 TAGLN3Q9UI15 199 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 OSGIN1Q9UJX0 560 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 TRIM33Q9UPN9 1127 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 SLC9A8Q9Y2E8 581 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 PMF1-BGLAPU3KQ54 211 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 TENM1Q9UKZ4 2725 aa14.36□□□□□ -0.11
SSH1-208ENST00000548522 TMED7-TICAM2A0A0A6YYA0 188 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 IGHV1-18A0A0C4DH31 117 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 ANKRD28O15084 1053 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 SCN2BO60939 215 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 BMP4P12644 408 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 IDH3AP50213 366 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 CLDN8P56748 225 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 DNAL1Q4LDG9 190 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 ZIC4Q8N9L1 334 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 BTBD10Q9BSF8 475 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 BPESC1Q9GZL8 116 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 SAP130Q9H0E3 1048 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 SEC61A2Q9H9S3 476 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 EXOSC3Q9NQT5 275 aaKnown RBP14.35□□□□□ -0.11
SSH1-208ENST00000548522 TMED7Q9Y3B3 224 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 FKBP7Q9Y680 259 aa14.35□□□□□ -0.11
SSH1-208ENST00000548522 LRP5LA4QPB2 252 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms