RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, human

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEPDC4-205	ENST00000548313	C1orf61	Q13536	156 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	MICB	Q29980	383 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	C1orf220	Q5T0J3	134 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	TTC23	Q5W5X9	447 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	LINC01551	Q86U37	167 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	RALGPS2	Q86X27	583 aa	Predicted RBP	2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	SLC35F2	Q8IXU6	374 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	OR4K14	Q8NGD5	310 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	OR2T34	Q8NGX1	318 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	THRSP	Q92748	146 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	SYAP1	Q96A49	352 aa	Predicted RBP	2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	STARD4	Q96DR4	205 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	RNF185	Q96GF1	192 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	SLC17A9	Q9BYT1	436 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	ROGDI	Q9GZN7	287 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	REEP4	Q9H6H4	257 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	PALMD	Q9NP74	551 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	AP1M2	Q9Y6Q5	423 aa		2.57	□□□□□ -2
DEPDC4-205	ENST00000548313	IGHV3-64D	A0A0J9YX35	117 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	SLC25A27	O95847	323 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	GIP	P09681	153 aa	Predicted RBP	2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	PNMA6A	P0CW24	399 aa	Predicted RBP	2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	TDGF1	P13385	188 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	RPA2	P15927	270 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	NPR2	P20594	1047 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	PAX7	P23759	505 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	TDGF1P3	P51864	188 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	GRB7	Q14451	532 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	ATP6AP1	Q15904	470 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	CES3	Q6UWW8	571 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	HSDL2	Q6YN16	418 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	CCDC80	Q76M96	950 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	C6orf120	Q7Z4R8	191 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	GPATCH11	Q8N954	259 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	NPB	Q8NG41	125 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	OR10G9	Q8NGN4	311 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	MAIP1	Q8WWC4	291 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	NDRG1	Q92597	394 aa	Known RBP	2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	ARPC1A	Q92747	370 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	FCRL1	Q96LA6	429 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	EML4	Q9HC35	981 aa	Known RBP	2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	IL26	Q9NPH9	171 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	GLRX2	Q9NS18	164 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	STAP1	Q9ULZ2	295 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	MRPS33	Q9Y291	106 aa	Known RBP	2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	MRPS7	Q9Y2R9	242 aa	Known RBP	2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	PDS5B	Q9NTI5	1447 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	COL4A4	P53420	1690 aa	Predicted RBP	2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	SCN2A	Q99250	2005 aa		2.56	□□□□□ -2
DEPDC4-205	ENST00000548313	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	LAD1	O00515	517 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	SCGN	O76038	276 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	PTMA	P06454	111 aa	Known RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	CCDC130	P13994	396 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	DES	P17661	470 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	HNF1A	P20823	631 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	HNRNPA2B1	P22626	353 aa	Known RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	LAP3	P28838	519 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	FMO3	P31513	532 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	DDOST	P39656	456 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	GPM6A	P51674	278 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	VGLL4	Q14135	290 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	EBI3	Q14213	229 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	GPNMB	Q14956	572 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	SLC15A2	Q16348	729 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	BCL7A	Q4VC05	210 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	C10orf120	Q5SQS8	335 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	MARCH8	Q5T0T0	291 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	TSPO2	Q5TGU0	170 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	PAQR7	Q86WK9	346 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	MFSD6L	Q8IWD5	586 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	CCDC65	Q8IXS2	484 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	SAXO1	Q8IYX7	474 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	H1FOO	Q8IZA3	346 aa	Predicted RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	DUSP18	Q8NEJ0	188 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	OR9G1	Q8NH87	305 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	FGF11	Q92914	225 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	EMG1	Q92979	244 aa	Known RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	RAB7B	Q96AH8	199 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	PELO	Q9BRX2	385 aa	Known RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	RAB33B	Q9H082	229 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	LRRN3	Q9H3W5	708 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	RANBP3	Q9H6Z4	567 aa	Predicted RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	RMND5A	Q9H871	391 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	CYTL1	Q9NRR1	136 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	UFSP2	Q9NUQ7	469 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	STOX2	Q9P2F5	926 aa	Predicted RBP	2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	EPS15L1	Q9UBC2	864 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	POLDIP2	Q9Y2S7	368 aa		2.55	□□□□□ -2
DEPDC4-205	ENST00000548313	FANCI	Q9NVI1	1328 aa		2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	IGLV4-69	A0A075B6H9	119 aa		2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	IGKV2D-24	A0A075B6R9	120 aa		2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	MBTPS2	O43462	519 aa		2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	MOS	P00540	346 aa		2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	UGT2B4	P06133	528 aa		2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	PSMA5	P28066	241 aa		2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	IL12A	P29459	219 aa		2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	RPL13A	P40429	203 aa	Known RBP	2.54	□□□□□ -2
DEPDC4-205	ENST00000548313	VDAC2	P45880	294 aa	Predicted RBP	2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms