RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.662e-7■■■□□ 18.1
GCN1-204ENST00000548132 IGKV1D-42A0A075B6H8 117 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 A0A096LPI6 279 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 A0A1W2PP18 115 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 GPR171O14626 319 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 CD40P25942 277 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 ACVR1BP36896 505 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 CRATP43155 626 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 IDH3AP50213 366 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 ZNF83P51522 516 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 CEACAM7Q14002 265 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 OR7A5Q15622 319 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 PAGE3Q5JUK9 113 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 C6orf10Q5SRN2 563 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 OTUD3Q5T2D3 398 aaPredicted RBP10.91□□□□□ -0.66
GCN1-204ENST00000548132 C6orf89Q6UWU4 347 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 P2RY8Q86VZ1 359 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 ZNF440Q8IYI8 595 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 ITCHQ96J02 903 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 MUS81Q96NY9 551 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 ALKBH3Q96Q83 286 aaPredicted RBP10.91□□□□□ -0.66
GCN1-204ENST00000548132 USB1Q9BQ65 265 aaKnown RBP10.91□□□□□ -0.66
GCN1-204ENST00000548132 WFDC6Q9BQY6 131 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 GRIP2Q9C0E4 1043 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 ZNF385DQ9H6B1 395 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 BCL2L10Q9HD36 194 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 TCF7L2Q9NQB0 619 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 ASB6Q9NWX5 421 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 VAPAQ9P0L0 249 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 B3GAT1Q9P2W7 334 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 DCTN4Q9UJW0 460 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 GMEB1Q9Y692 573 aa10.91□□□□□ -0.66
GCN1-204ENST00000548132 RNF223E7ERA6 249 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 EIF1BO60739 113 aaKnown RBP10.9□□□□□ -0.66
GCN1-204ENST00000548132 MRPL33O75394 65 aaKnown RBP10.9□□□□□ -0.66
GCN1-204ENST00000548132 FKBP2P26885 142 aaKnown RBP10.9□□□□□ -0.66
GCN1-204ENST00000548132 PCSK6P29122 969 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 IRX1P78414 480 aaPredicted RBP10.9□□□□□ -0.66
GCN1-204ENST00000548132 FADDQ13158 208 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 VEZF1Q14119 521 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 CLEC12BQ2HXU8 276 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 GLIPR1L2Q4G1C9 344 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 C1orf140Q5VVS0 124 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 PRAMEF8Q5VWM4 474 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 PRAMEF7Q5VXH5 474 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 WBP2NLQ6ICG8 309 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 BLOC1S3Q6QNY0 202 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 MYPOPQ86VE0 399 aaPredicted RBP10.9□□□□□ -0.66
GCN1-204ENST00000548132 EPHX4Q8IUS5 362 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 WDFY1Q8IWB7 410 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 UBE2J2Q8N2K1 259 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 CADM2Q8N3J6 435 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 C1orf162Q8NEQ5 155 aaPredicted RBP10.9□□□□□ -0.66
GCN1-204ENST00000548132 BOD1Q96IK1 185 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 CPPED1Q9BRF8 314 aaPredicted RBP10.9□□□□□ -0.66
GCN1-204ENST00000548132 SEC61A2Q9H9S3 476 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 NGBQ9NPG2 151 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 SLC17A5Q9NRA2 495 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 MALRD1Q5VYJ5 2156 aa10.9□□□□□ -0.66
GCN1-204ENST00000548132 RTTNQ86VV8 2226 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 A0A0G2JPF8 293 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 FAM171A2A8MVW0 826 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 KIAA1324LA8MWY0 1029 aaPredicted RBP10.89□□□□□ -0.67
GCN1-204ENST00000548132 HNRNPCL2B2RXH8 293 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 HNRNPCL3B7ZW38 293 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 ATP6V1G2-DDX39BF2Z307 99 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 NR5A2O00482 541 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 HNRNPCL1O60812 293 aaKnown RBP10.89□□□□□ -0.67
GCN1-204ENST00000548132 HNRNPCL4P0DMR1 293 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 PNMTP11086 282 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 SELENOPP49908 381 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 MAP2K6P52564 334 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 GNA13Q14344 377 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 ADRM1Q16186 407 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 HIKESHIQ53FT3 197 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 C17orf78Q8N4C9 275 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 NFKBIDQ8NI38 313 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 BBS10Q8TAM1 723 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 KTI12Q96EK9 354 aaPredicted RBP10.89□□□□□ -0.67
GCN1-204ENST00000548132 ATP6V1G3Q96LB4 118 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 SF3B5Q9BWJ5 86 aaKnown RBP10.89□□□□□ -0.67
GCN1-204ENST00000548132 RMND5AQ9H871 391 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 ADPRHL2Q9NX46 363 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 CISD1Q9NZ45 108 aaKnown RBP10.89□□□□□ -0.67
GCN1-204ENST00000548132 CALML5Q9NZT1 146 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 B3GALT5Q9Y2C3 310 aa10.89□□□□□ -0.67
GCN1-204ENST00000548132 IGHV4-30-2A0A087WSY4 118 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 ZNF503-AS2A6NEH8 195 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 A8MVM7 634 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 CLIC1O00299 241 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 POLR3GO15318 223 aaPredicted RBP10.88□□□□□ -0.67
GCN1-204ENST00000548132 TRAF3IP2O43734 574 aaPredicted RBP10.88□□□□□ -0.67
GCN1-204ENST00000548132 TPST1O60507 370 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 TPST2O60704 377 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 ERLIN1O75477 346 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 ZNF432O94892 652 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 ANP32DO95626 131 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 GPIP06744 558 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 UQCRBP14927 111 aa10.88□□□□□ -0.67
GCN1-204ENST00000548132 MPGP29372 298 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms