RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 STAB1Q9NY15 2570 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 LIPT2A6NK58 231 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 ELOA3DA6NLF2 546 aaPredicted RBP17.8■□□□□ 0.44
SSH1-207ENST00000547862 PHF1O43189 567 aaPredicted RBP17.8■□□□□ 0.44
SSH1-207ENST00000547862 FAM157CP0CG43 387 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 KITP10721 976 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 BMP4P12644 408 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 EPHA3P29320 983 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 TUBA1BP68363 451 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 TUBA4AP68366 448 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 VLDLRP98155 873 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 GGTLC2Q14390 218 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 ELOA3BQ3SY89 546 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 LIN52Q52LA3 116 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 NXNQ6DKJ4 435 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 OGFOD2Q6N063 350 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 IL17RELQ6ZVW7 336 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 TUBA1AQ71U36 451 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 ELOA3Q8NG57 546 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 OR52P1PQ8NH57 321 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 TMEM45BQ96B21 275 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 TAPBPLQ9BX59 468 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 WDR55Q9H6Y2 383 aaPredicted RBP17.8■□□□□ 0.44
SSH1-207ENST00000547862 CHODLQ9H9P2 273 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 P2RX2Q9UBL9 471 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 CDC42EP3Q9UKI2 254 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 PMF1-BGLAPU3KQ54 211 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 MALRD1Q5VYJ5 2156 aa17.8■□□□□ 0.44
SSH1-207ENST00000547862 AQP7P3A6NL99 342 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 RFXANKO14593 260 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 FRS3O43559 492 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 SNUPNO95149 360 aaKnown RBP17.79■□□□□ 0.44
SSH1-207ENST00000547862 LGI1O95970 557 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 IGHV4-31P0DP07 118 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 ETFAP13804 333 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 NCF2P19878 526 aaPredicted RBP17.79■□□□□ 0.44
SSH1-207ENST00000547862 APOBEC3AP31941 199 aaPredicted RBP17.79■□□□□ 0.44
SSH1-207ENST00000547862 EFNA4P52798 201 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 MPP2Q14168 576 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 CEP85LQ5SZL2 805 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 VHLLQ6RSH7 139 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 LRRC34Q8IZ02 419 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 KIRREL3Q8IZU9 778 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 TMEM158Q8WZ71 300 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 SORCS2Q96PQ0 1159 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 BEX2Q9BXY8 128 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 MTHFD2LQ9H903 347 aaPredicted RBP17.79■□□□□ 0.44
SSH1-207ENST00000547862 SLC6A13Q9NSD5 602 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 HAO1Q9UJM8 370 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 ZNF443Q9Y2A4 671 aaPredicted RBP17.79■□□□□ 0.44
SSH1-207ENST00000547862 FKBP7Q9Y680 259 aa17.79■□□□□ 0.44
SSH1-207ENST00000547862 FAAHO00519 579 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 ANP32DO95626 131 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 KRT75O95678 551 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 CSF3P09919 207 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 USF1P22415 310 aaPredicted RBP17.78■□□□□ 0.44
SSH1-207ENST00000547862 CRATP43155 626 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 SELENOPP49908 381 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 COPZ1P61923 177 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 SNRPD2P62316 118 aaKnown RBP17.78■□□□□ 0.44
SSH1-207ENST00000547862 TBRG1Q3YBR2 411 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 GTDC1Q4AE62 458 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 HHATQ5VTY9 493 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 PRAMEF8Q5VWM4 474 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 PRAMEF7Q5VXH5 474 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 CYB5R2Q6BCY4 276 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 TMEM225Q6GV28 225 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 NIPAL3Q6P499 406 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 SLC46A3Q7Z3Q1 461 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 SPATA19Q7Z5L4 167 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 ZNF440Q8IYI8 595 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 ARIH2OSQ8N7S6 290 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 ANKS4BQ8N8V4 417 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 ZIC4Q8N9L1 334 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 POMGNT2Q8NAT1 580 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 MGARPQ8TDB4 240 aa17.78■□□□□ 0.44
SSH1-207ENST00000547862 CACYBPQ9HB71 228 aaKnown RBP17.78■□□□□ 0.44
SSH1-207ENST00000547862 SSU72Q9NP77 194 aaKnown RBP17.78■□□□□ 0.44
SSH1-207ENST00000547862 IGHV1-18A0A0C4DH31 117 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 CDHR4A6H8M9 788 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 ZNF587BE7ETH6 402 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 PRG2P13727 222 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 PDLIM4P50479 330 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 DSTNP60981 165 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 TXNL4AP83876 142 aaKnown RBP17.77■□□□□ 0.44
SSH1-207ENST00000547862 MAPK11Q15759 364 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 AP1ARQ63HQ0 302 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 ATG16L1Q676U5 607 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 WBP2NLQ6ICG8 309 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 WDR93Q6P2C0 686 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 ABHD12BQ7Z5M8 362 aaPredicted RBP17.77■□□□□ 0.44
SSH1-207ENST00000547862 MREGQ8N565 214 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 OR1K1Q8NGR3 316 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 SLC38A2Q96QD8 506 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 VRK1Q99986 396 aaPredicted RBP17.77■□□□□ 0.44
SSH1-207ENST00000547862 PIMREGQ9BSJ6 248 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 ADAM19Q9H013 955 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 SHARPINQ9H0F6 387 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 GPR45Q9Y5Y3 372 aa17.77■□□□□ 0.44
SSH1-207ENST00000547862 A0A096LPE4 126 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms