RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ANKRD34AQ69YU3 496 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 GABRG1Q8N1C3 465 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 MFSD8Q8NHS3 518 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 RNF217Q8TC41 542 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 NOSIPQ9Y314 301 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 LRBAP50851 2863 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 TACC2O95359 2948 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 A0A087WUJ7 227 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 AQP7P3A6NL99 342 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 CPSF4LA6NMK7 179 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 FTCDNL1E5RQL4 147 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 GPR171O14626 319 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 IFNA14P01570 189 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 NTF4P34130 210 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 PSME3P61289 254 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 SLC17A1Q14916 467 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 ENTPD8Q5MY95 495 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 ZNF613Q6PF04 617 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 C22orf34Q6ZV56 151 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 CXorf67Q86X51 503 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 P3H2Q8IVL5 708 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 ZNF100Q8IYN0 542 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 PROX1Q92786 737 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 SLC25A36Q96CQ1 311 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 LRRC37BQ96QE4 947 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 MED18Q9BUE0 208 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 RASSF1Q9NS23 344 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 PRSS50Q9UI38 385 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 BAG5Q9UL15 447 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 SH3GLB1Q9Y371 365 aa16.6■□□□□ 0.25
PRPF40B-206ENST00000547764 CASKO14936 926 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 DCTN3O75935 186 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 ADAP00813 363 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 PSMB1P20618 241 aaKnown RBP16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 P2RY4P51582 365 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 LRRC23Q53EV4 343 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 CYBRD1Q53TN4 286 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 SWT1Q5T5J6 900 aaKnown RBP16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 C5orf46Q6UWT4 87 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 TSPYL5Q86VY4 417 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 ANKS4BQ8N8V4 417 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 TAAR8Q969N4 342 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 POLDIP3Q9BY77 421 aaKnown RBP16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 ALG2Q9H553 416 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 SLC9A8Q9Y2E8 581 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 GPR52Q9Y2T5 361 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 FLVCR1Q9Y5Y0 555 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 CSMD1Q96PZ7 3565 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 POLQO75417 2590 aa16.59■□□□□ 0.25
PRPF40B-206ENST00000547764 ABCA4P78363 2273 aa16.58■□□□□ 0.25
PRPF40B-206ENST00000547764 TRAV36DV7A0A075B6V5 113 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 NDUFAB1O14561 156 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 OR2T1O43869 369 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 THY1P04216 161 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 TNFRSF1BP20333 461 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 GSK3BP49841 420 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 TSC22D1Q15714 1073 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 FAM69AQ5T7M9 428 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 TMEM225Q6GV28 225 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 LINC00114Q6XXX2 140 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 Q6ZT83 130 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 CARM1Q86X55 608 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 ADAMTS16Q8TE57 1224 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 APH1AQ96BI3 265 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 ZC3HAV1LQ96H79 300 aaKnown RBP16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 SF3B5Q9BWJ5 86 aaKnown RBP16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 PCDHAC1Q9H158 963 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 CLEC4MQ9H2X3 399 aaPredicted RBP16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 ARL8BQ9NVJ2 186 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 ABCD2Q9UBJ2 740 aa16.58■□□□□ 0.24
PRPF40B-206ENST00000547764 PDZD2O15018 2839 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 SPG11Q96JI7 2443 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 CHP2O43745 196 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 FZD7O75084 574 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 MRPL33O75394 65 aaKnown RBP16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 LYPD3O95274 346 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 FAM107AO95990 144 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 IGHV3-9P01782 118 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 PPP3CBP16298 524 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 PTNP21246 168 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 P2RY6Q15077 328 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 SFRP5Q5T4F7 317 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 GPAT4Q86UL3 456 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 ZIC4Q8N9L1 334 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 OR9K2Q8NGE7 335 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 TPD52L3Q96J77 140 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 TMEM43Q9BTV4 400 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 HDHD5Q9BXW7 423 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 ACTR6Q9GZN1 396 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 OR10A4Q9H209 315 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 ZNF226Q9NYT6 803 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 SEC14L4Q9UDX3 406 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 TAGLN3Q9UI15 199 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 CSMD2Q7Z408 3487 aa16.57■□□□□ 0.24
PRPF40B-206ENST00000547764 TRAPPC13A5PLN9 417 aa16.56■□□□□ 0.24
PRPF40B-206ENST00000547764 CXCR6O00574 342 aa16.56■□□□□ 0.24
PRPF40B-206ENST00000547764 GSTA4O15217 222 aa16.56■□□□□ 0.24
PRPF40B-206ENST00000547764 SHOX2O60902 331 aaPredicted RBP16.56■□□□□ 0.24
PRPF40B-206ENST00000547764 VAMP5O95183 116 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms