RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 GCNT6Q5T4J0 391 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 C1orf140Q5VVS0 124 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 TMEM225Q6GV28 225 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 REEP3Q6NUK4 255 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 KRT73Q86Y46 540 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 SMAP2Q8WU79 429 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 RADILQ96JH8 1075 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 COX4I2Q96KJ9 171 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 SPATA5L1Q9BVQ7 753 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 AMBRA1Q9C0C7 1298 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 TMEM38AQ9H6F2 299 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 UPB1Q9UBR1 384 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 DCTN4Q9UJW0 460 aa16.42■□□□□ 0.22
CHMP1A-203ENST00000547614 EVPLLA8MZ36 301 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 TMEM229AB2RXF0 380 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 OVOL3O00110 214 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 ITGA5P08648 1049 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 CDK6Q00534 326 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 TGFBR3Q03167 851 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 TMEM108Q6UXF1 575 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 LSMEM1Q8N8F7 131 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 ZIC4Q8N9L1 334 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 C1orf162Q8NEQ5 155 aaPredicted RBP16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 KBTBD8Q8NFY9 601 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 OR9K2Q8NGE7 335 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 POM121Q96HA1 1249 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 C12orf10Q9HB07 376 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 SLC7A10Q9NS82 523 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 ADPRHL2Q9NX46 363 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 NPAP1Q9NZP6 1156 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 MGAT4BQ9UQ53 548 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 SLC25A15Q9Y619 301 aa16.41■□□□□ 0.22
CHMP1A-203ENST00000547614 FRS3O43559 492 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 SOD3P08294 240 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 PTAFRP25105 342 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 P2RY4P51582 365 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 ATP5J2P56134 94 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 TSPO2Q5TGU0 170 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 DHRS4L2Q6PKH6 230 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 KLHL17Q6TDP4 642 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 C6orf89Q6UWU4 347 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 DLEU7Q6UYE1 221 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 AAED1Q7RTV5 226 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 C10orf111Q8N326 155 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 C17orf78Q8N4C9 275 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 POMGNT2Q8NAT1 580 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 OR52E4Q8NGH9 312 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 MFSD8Q8NHS3 518 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 NFKBIDQ8NI38 313 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 NEUROG1Q92886 237 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 TRMT61AQ96FX7 289 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 SMR3AQ99954 134 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 GRIP2Q9C0E4 1043 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 CISD1Q9NZ45 108 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 TRIM33Q9UPN9 1127 aa16.4■□□□□ 0.22
CHMP1A-203ENST00000547614 SHISA9B4DS77 424 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 H7C1Q1 480 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 ABCD4O14678 606 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 AHSA1O95433 338 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 SLC6A2P23975 617 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 MPGP29372 298 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 FOXG1P55316 489 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 PGGHGQ32M88 737 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 C5orf46Q6UWT4 87 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 CLEC9AQ6UXN8 241 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 ABHD12BQ7Z5M8 362 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 GPAT4Q86UL3 456 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 BHLHE22Q8NFJ8 381 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 OR52N5Q8NH56 324 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 TSPEARQ8WU66 669 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 BOD1Q96IK1 185 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 ZNF385AQ96PM9 386 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 ZNF607Q96SK3 696 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 SIKE1Q9BRV8 207 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 RSPO3Q9BXY4 272 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 SLCO5A1Q9H2Y9 848 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 IKZF5Q9H5V7 419 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 FAIMQ9NVQ4 179 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 RPS6KB2Q9UBS0 482 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 LEF1Q9UJU2 399 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 RASD1Q9Y272 281 aa16.39■□□□□ 0.21
CHMP1A-203ENST00000547614 PRORSD1PA6NEY8 169 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 OR6C65A6NJZ3 312 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 ELOA3DA6NLF2 546 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 FTCDNL1E5RQL4 147 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 EDF1O60869 148 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 FZD7O75084 574 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 HOXB4P17483 251 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 HOXC5Q00444 222 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 EGR4Q05215 589 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 SCARB2Q14108 478 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 ETFDHQ16134 617 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 ADRM1Q16186 407 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 ELOA3BQ3SY89 546 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 RUNDC3AQ59EK9 446 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 METTL21CQ5VZV1 264 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 CREB3L2Q70SY1 520 aa16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 LSRQ86X29 649 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-203ENST00000547614 CIARTQ8N365 385 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms