RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ACOD1A6NK06 481 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 GLB1P16278 677 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 RPS4Y1P22090 263 aaKnown RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 FBXW4P57775 412 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 CCL7P80098 99 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF45Q02386 682 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 TEKQ02763 1124 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 INPP5JQ15735 1006 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 GID4Q8IVV7 300 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 HSD17B8Q92506 261 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 NPAS1Q99742 590 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 TRIM36Q9NQ86 728 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 CCDC59Q9P031 241 aaKnown RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 PLEKHB1Q9UF11 243 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 SLC22A31A6NKX4 558 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 DCTN6O00399 190 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 TFP02787 698 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 MT-ND5P03915 603 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 OR8G3PP0DMU2 310 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 SERTAD2Q14140 314 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 ALG10Q5BKT4 473 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 RSBN1Q5VWQ0 802 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 TMPRSS11FQ6ZWK6 438 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 C9orf40Q8IXQ3 194 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 RNF113BQ8IZP6 322 aaKnown RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF527Q8NB42 609 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 LSM14AQ8ND56 463 aaKnown RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 OR6N2Q8NGY6 317 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 BRIX1Q8TDN6 353 aaKnown RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 SLC25A46Q96AG3 418 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 OMA1Q96E52 524 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 SYT4Q9H2B2 425 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 MIXL1Q9H2W2 232 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 PALMDQ9NP74 551 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 TRBV2A0A0J9YWF9 115 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 RNF13O43567 381 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 HEXBP07686 556 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 IL7P13232 177 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 GABRA5P31644 462 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 MAP3K8P41279 467 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 GABRA4P48169 554 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF117Q03924 483 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 FUT7Q11130 342 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 PWWP2BQ6NUJ5 590 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF574Q6ZN55 896 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 SERPINA12Q8IW75 414 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ARHGEF39Q8N4T4 335 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 NR4A3Q92570 626 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 LMF2Q9BU23 707 aaKnown RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ULBP3Q9BZM4 244 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 DUSP15Q9H1R2 295 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 C14orf105Q9NVL8 296 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 RASD1Q9Y272 281 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 TECTAO75443 2155 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 SCRG1O75711 98 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 CDKN2AP42771 156 aaKnown RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 GPR143P51810 404 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 PSPHP78330 225 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 TPBGQ13641 420 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 MELKQ14680 651 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 HLA-BQ31612 363 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 TMEM91Q6ZNR0 172 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 CADM4Q8NFZ8 388 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 C1orf216Q8TAB5 229 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 FGF11Q92914 225 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 GCDHQ92947 438 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 OR14A2Q96R54 314 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 SDHCQ99643 169 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 CHRDQ9H2X0 955 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 GPR27Q9NS67 375 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 MRPL15Q9P015 296 aaKnown RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 WNT16Q9UBV4 365 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 H0YIG0 161 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 F10P00742 488 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 FBXO45P0C2W1 286 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ABCD3P28288 659 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 NR4A2P43354 598 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 EIF1AXP47813 144 aaKnown RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 TMED10P49755 219 aaKnown RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF79Q15937 498 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 SLC25A35Q3KQZ1 300 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ACSM3Q53FZ2 586 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 TRIQKQ629K1 86 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 LRRC69Q6ZNQ3 347 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 C19orf18Q8NEA5 215 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF671Q8TAW3 534 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 DAZLQ92904 295 aaKnown RBP11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ADGRL4Q9HBW9 690 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 MED11Q9P086 117 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 GRHPRQ9UBQ7 328 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 COPS3Q9UNS2 423 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 B3GNT3Q9Y2A9 372 aa11.61□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF354AO60765 605 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-209ENST00000547018 PTP4A3O75365 173 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 OR6A2O95222 327 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 TCEAL6Q6IPX3 200 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 QSOX2Q6ZRP7 698 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 DPY19L4Q7Z388 723 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 CCDC190Q86UF4 302 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms