RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PRPS1P60891 318 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 GMFBP60983 142 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 SKP1P63208 163 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 RPS21P63220 83 aaKnown RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 SIRPAP78324 504 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 TLE2Q04725 743 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 PUDPQ08623 228 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 BIKQ13323 160 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ENPP2Q13822 863 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 LRRC32Q14392 662 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF234Q14588 700 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 MFSD13AQ14CX5 517 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 PON3Q15166 354 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 DCST2Q5T1A1 773 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 FHL5Q5TD97 284 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 FAM198BQ6UWH4 519 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 DPY19L2P2Q6ZN68 376 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 DNM1P46Q6ZS02 220 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ASB18Q6ZVZ8 466 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 LINGO2Q7L985 606 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 SHFQ7M4L6 423 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 UBE2Q1Q7Z7E8 422 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 GPAT4Q86UL3 456 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 COMMD7Q86VX2 200 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 NR2C2APQ86WQ0 139 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 SLC35F3Q8IY50 421 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 UBE2J2Q8N2K1 259 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 EIF4E3Q8N5X7 224 aaKnown RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF366Q8N895 744 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 BBS1Q8NFJ9 593 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 OR52E1Q8NGJ3 308 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 OR9A2Q8NGT5 310 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 LHFPL5Q8TAF8 219 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF671Q8TAW3 534 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ADAMTS18Q8TE60 1221 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 GIMAP1Q8WWP7 306 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 FCAMRQ8WWV6 532 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 THAP4Q8WY91 577 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 HERVK_113Q902F9 699 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 CNOT9Q92600 299 aaKnown RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 KAT2AQ92830 837 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 GHSRQ92847 366 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 PTP4A1Q93096 173 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 PPP1R14AQ96A00 147 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 FAM131CQ96AQ9 280 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 TM4SF19Q96DZ7 209 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 S100A16Q96FQ6 103 aaKnown RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 PAWRQ96IZ0 340 aaKnown RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 C4orf36Q96KX1 117 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 GPX7Q96SL4 187 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ORAI3Q9BRQ5 295 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 SEMA4CQ9C0C4 833 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 AICDAQ9GZX7 198 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ALX4Q9H161 411 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 C20orf85Q9H1P6 137 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ISG20L2Q9H9L3 353 aaKnown RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 TRPV4Q9HBA0 871 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 SLC6A20Q9NP91 592 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ZDHHC4Q9NPG8 344 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 CLDND1Q9NY35 253 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 SLCO1C1Q9NYB5 712 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF107Q9UII5 783 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 SCML1Q9UN30 329 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 GPR55Q9Y2T6 319 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF281Q9Y2X9 895 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 INSL6Q9Y581 213 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 ENTPD2Q9Y5L3 495 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 LTBP2Q14767 1821 aa5.95□□□□□ -1.46
SNHG1-225ENST00000545920 NUP210Q8TEM1 1887 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 A0A1W2PPL8 197 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 ANKRD20A5PA0PJZ0 165 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 IFITM5A6NNB3 132 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 F8W735 103 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 J3QLW9 94 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 SULT1C2O00338 296 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 LANCL1O43813 399 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 SERPINI2O75830 405 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 AQP8O94778 261 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 NKX2-2O95096 273 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 CH25HO95992 272 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 PCCBP05166 539 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 CHRM5P08912 532 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF19P17023 458 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 MAKP20794 623 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 CERS1P27544 350 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 PSMB5P28074 263 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 NOS3P29474 1203 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 PYCR1P32322 319 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 GDNFP39905 211 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF81P51508 661 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 FXYD6P3P58550 94 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 KIAA1024LP59773 190 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 SNRPD2P62316 118 aaKnown RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 POU6F2P78424 691 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 NTHL1P78549 312 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF85Q03923 595 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 STX4Q12846 297 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 EXOSC2Q13868 293 aaKnown RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 CRMP1Q14194 572 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms