RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 MAKP20794 623 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 IDUAP35475 653 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 CLK1P49759 484 aaKnown RBP14.55□□□□□ -0.08
LIMS2-217ENST00000545738 HMGA2P52926 109 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF74Q16587 644 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 FAM69AQ5T7M9 428 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 NSUN5P2Q63ZY6 315 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 FJX1Q86VR8 437 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 HS3ST5Q8IZT8 346 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 TMEM99Q8N816 258 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 ABHD3Q8WU67 409 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 SLC25A36Q96CQ1 311 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF347Q96SE7 839 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 MYCBPQ99417 103 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-217ENST00000545738 MEMO1Q9Y316 297 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 SH3PXD2BA1X283 911 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 CDC42EP2O14613 210 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 AHSA1O95433 338 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 CH25HO95992 272 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 GABRA1P14867 456 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 RBM34P42696 430 aaKnown RBP14.55□□□□□ -0.08
LIMS2-217ENST00000545738 OR2B6P58173 313 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 SRSF1Q07955 248 aaKnown RBP eCLIP14.55□□□□□ -0.08
LIMS2-217ENST00000545738 FHL1Q13642 323 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 SGCBQ16585 318 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 PPP4R4Q6NUP7 873 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 B3GNT6Q6ZMB0 384 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 OR9Q2Q8NGE9 314 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 RNF128Q8TEB7 428 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 LRTOMTQ8WZ04 291 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 ANKRD19PQ9H560 264 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 STOML1Q9UBI4 398 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 TRAPPC4Q9Y296 219 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 AP4S1Q9Y587 144 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 MAGED1Q9Y5V3 778 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-217ENST00000545738 FREM1Q5H8C1 2179 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 MBD3L4A6NDZ8 208 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 MBD3L3A6NE82 208 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 MBD3L5A6NJ08 208 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 CD8B2A6NJW9 211 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 SLC22A20A6NK97 555 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 M0R082 166 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 LRRTM2O43300 516 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 RNF224P0DH78 156 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 FKBP2P26885 142 aaKnown RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 GRPRP30550 384 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 GPR4P46093 362 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 OMPP47874 163 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 AGFG1P52594 562 aaKnown RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 NUP107P57740 925 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 RPS3AP61247 264 aaKnown RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 FOXF2Q12947 444 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 ANKRD34AQ69YU3 496 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF770Q6IQ21 691 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 MBOAT2Q6ZWT7 520 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 ATCAYQ86WG3 371 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 GCNT2Q8N0V5 402 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 KDM8Q8N371 416 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 OR4K5Q8NGD3 323 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 MFSD8Q8NHS3 518 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 MBD3L2Q8NHZ7 208 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF417Q8TAU3 575 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 POP5Q969H6 163 aaKnown RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 CPNE4Q96A23 557 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 ALPK1Q96QP1 1244 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF587Q96SQ5 575 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 SLC19A3Q9BZV2 496 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 RNF122Q9H9V4 155 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 KLHL13Q9P2N7 655 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 ERRFI1Q9UJM3 462 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 CLEC4AQ9UMR7 237 aa14.54□□□□□ -0.08
LIMS2-217ENST00000545738 FASNP49327 2511 aaKnown RBP14.54□□□□□ -0.08
LIMS2-217ENST00000545738 UTP20O75691 2785 aaKnown RBP14.53□□□□□ -0.08
LIMS2-217ENST00000545738 TNFRSF11BO00300 401 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 CCL21O00585 134 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 KRT36O76013 467 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 NTF4P34130 210 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 ADORA2A-AS1P86434 159 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 PMPCAQ10713 525 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 CDSNQ15517 529 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 ABLIM2Q6H8Q1 611 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF730Q6ZMV8 503 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 ZER1Q7Z7L7 766 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 AMIGO2Q86SJ2 522 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 CALHM2Q9HA72 323 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 B3GAT1Q9P2W7 334 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 MED31Q9Y3C7 131 aa14.53□□□□□ -0.08
LIMS2-217ENST00000545738 SAMHD1Q9Y3Z3 626 aaKnown RBP14.53□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF716A6NP11 495 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 E9PLN8 166 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 KLF4O43474 513 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 HPRP00739 348 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 ASAH2BP0C7U1 165 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 IFI30P13284 250 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF26P17031 533 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-217ENST00000545738 EDNRAP25101 427 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 CTBP2P56545 445 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 CSNK2A1P68400 391 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-217ENST00000545738 PRKCDQ05655 676 aa14.52□□□□□ -0.08
LIMS2-217ENST00000545738 GUSBP1Q15486 140 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms