RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CPLX4Q7Z7G2 160 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 GPAT4Q86UL3 456 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 CALHM3Q86XJ0 350 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 WFDC8Q8IUA0 241 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 POU5F2Q8N7G0 328 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 HSD17B8Q92506 261 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 SLC38A4Q969I6 547 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 SLC25A36Q96CQ1 311 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 ARHGDIGQ99819 225 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 PRR14Q9BWN1 585 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 LIME1Q9H400 295 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 PLEKHF2Q9H8W4 249 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 NGBQ9NPG2 151 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 ASB6Q9NWX5 421 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 AP3M1Q9Y2T2 418 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 PDZD2O15018 2839 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 TACC2O95359 2948 aa13.92□□□□□ -0.18
CCDC78-216ENST00000544996 LYZL6O75951 148 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 IFNA14P01570 189 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 RAF1P04049 648 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 COX4I1P13073 169 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 EDNRAP25101 427 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 LSP1P33241 339 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 RPS5P46782 204 aaKnown RBP13.91□□□□□ -0.18
CCDC78-216ENST00000544996 IST1P53990 364 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 NR1H2P55055 460 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 VEZF1Q14119 521 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 KEAP1Q14145 624 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 TSC22D1Q15714 1073 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 SWT1Q5T5J6 900 aaKnown RBP13.91□□□□□ -0.18
CCDC78-216ENST00000544996 ALKBH2Q6NS38 261 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 ZNF613Q6PF04 617 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 PAMR1Q6UXH9 720 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 CCDC80Q76M96 950 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 SSX8Q7RTT4 187 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 ARPINQ7Z6K5 226 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 OR9K2Q8NGE7 335 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 TAMM41Q96BW9 452 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 RCN3Q96D15 328 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 KTI12Q96EK9 354 aaPredicted RBP13.91□□□□□ -0.18
CCDC78-216ENST00000544996 EPYCQ99645 322 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 MCHR1Q99705 422 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 EFCAB1Q9HAE3 211 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 UPB1Q9UBR1 384 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 RASD1Q9Y272 281 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 FLVCR1Q9Y5Y0 555 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 CSMD1Q96PZ7 3565 aa13.91□□□□□ -0.18
CCDC78-216ENST00000544996 CSMD2Q7Z408 3487 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 MYO9AB2RTY4 2548 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 TRAV36DV7A0A075B6V5 113 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 A0A087WUJ7 227 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 A0A0B4J2E0 115 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 A0A1B0GX12 115 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 GMNCA6NCL1 334 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 M0R3H8 397 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 AIM2O14862 343 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 SIAH2O43255 324 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 IGHV3-9P01782 118 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 GGT1P19440 569 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 IGHV1-2P23083 117 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 ART1P52961 327 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 CDH12P55289 794 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 EGR4Q05215 589 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 NRF1Q16656 503 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 FAM69AQ5T7M9 428 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 AAED1Q7RTV5 226 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 P2RY8Q86VZ1 359 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 LSRQ86X29 649 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-216ENST00000544996 LURAP1LQ8IV03 231 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 OR2T12Q8NG77 320 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 GPR32P1Q8NGA4 272 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 VANGL1Q8TAA9 524 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-216ENST00000544996 PROX1Q92786 737 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 TMEM45BQ96B21 275 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 ZNF583Q96ND8 569 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 WFDC6Q9BQY6 131 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 PTDSS2Q9BVG9 487 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 CCM2LQ9NUG4 571 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-216ENST00000544996 BAG5Q9UL15 447 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 PLEKHA6Q9Y2H5 1048 aa13.9□□□□□ -0.18
CCDC78-216ENST00000544996 POLQO75417 2590 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 MPDZO75970 2070 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-216ENST00000544996 CIB4A0PJX0 185 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 CCT8L1PA6NM43 557 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 FAM220BPB1ANY3 271 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 FTCDNL1E5RQL4 147 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 KLF4O43474 513 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 TPST2O60704 377 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 COX5AP20674 150 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 CD247P20963 164 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 NTF4P34130 210 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 FAPQ12884 760 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 MFSD13AQ14CX5 517 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 TAB1Q15750 504 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 STK11Q15831 433 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 OR6T1Q8NGN1 323 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 TAAR8Q969N4 342 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 MUCL1Q96DR8 90 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 CMTM5Q96DZ9 223 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms