RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ASB6Q9NWX5 421 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 MALT1Q9UDY8 824 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 RASD1Q9Y272 281 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 PLEKHA6Q9Y2H5 1048 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 CAPN7Q9Y6W3 813 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 VPS13CQ709C8 3753 aa10.46□□□□□ -0.74
HDAC4-216ENST00000544989 ZC3H12DA2A288 527 aaKnown RBP10.45□□□□□ -0.74
HDAC4-216ENST00000544989 FRS3O43559 492 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 CCDC22O60826 627 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 MFN2O95140 757 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 IFNA14P01570 189 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 THBDP07204 575 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 GGT1P19440 569 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 PAX7P23759 505 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 PCBP3P57721 371 aaKnown RBP10.45□□□□□ -0.74
HDAC4-216ENST00000544989 MTPNP58546 118 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 KLF10Q13118 480 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 ACKR1Q16570 336 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 DEFB113Q30KQ7 82 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 ALG10BQ5I7T1 473 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 TIMM23BQ5SRD1 257 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 TMEM225Q6GV28 225 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 ERICH5Q6P6B1 374 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 CASP12Q6UXS9 341 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 PTOV1Q86YD1 416 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 WFDC8Q8IUA0 241 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 CCDC103Q8IW40 242 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 POMGNT2Q8NAT1 580 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 OR6S1Q8NH40 331 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 SLC26A7Q8TE54 656 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 NRGNQ92686 78 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 ZNF775Q96BV0 537 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-216ENST00000544989 LRRC58Q96CX6 371 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 ECSITQ9BQ95 431 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 SAR1AQ9NR31 198 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 TAS2R16Q9NYV7 291 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 UPB1Q9UBR1 384 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 FLVCR1Q9Y5Y0 555 aa10.45□□□□□ -0.74
HDAC4-216ENST00000544989 HRNRQ86YZ3 2850 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-216ENST00000544989 FREM1Q5H8C1 2179 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 TRAV36DV7A0A075B6V5 113 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-216ENST00000544989 A0A1B0GWA3 101 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 CIB4A0PJX0 185 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 FBP2O00757 339 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 MRASO14807 208 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 SIAH2O43255 324 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 KLF4O43474 513 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 FZD7O75084 574 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 AQP1P29972 269 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 BNIP2Q12982 314 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 CAPRIN1Q14444 709 aaKnown RBP10.44□□□□□ -0.74
HDAC4-216ENST00000544989 PPA1Q15181 289 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 VMACQ2NL98 169 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 FAM69AQ5T7M9 428 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 REP15Q6BDI9 236 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 NANOGP8Q6NSW7 305 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 ZNF613Q6PF04 617 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 ARPINQ7Z6K5 226 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 GPAT4Q86UL3 456 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 C10orf111Q8N326 155 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 C17orf78Q8N4C9 275 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 ZNF433Q8N7K0 673 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-216ENST00000544989 C1orf162Q8NEQ5 155 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-216ENST00000544989 OR9K2Q8NGE7 335 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 OR10A6Q8NH74 314 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 PLPPR2Q96GM1 343 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 LIME1Q9H400 295 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 NANOGQ9H9S0 305 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 ADPRHL2Q9NX46 363 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 PRSS50Q9UI38 385 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 B3GALT5Q9Y2C3 310 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 CORINQ9Y5Q5 1042 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 ACANP16112 2415 aa10.44□□□□□ -0.74
HDAC4-216ENST00000544989 A0A087WUJ7 227 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 A0A0B4J2E0 115 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 A0A1B0GX12 115 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 OR5H1A6NKK0 313 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 CCT8L1PA6NM43 557 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 M0QX08 132 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 AIM2O14862 343 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 ARHGEF9O43307 516 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 AKAP8O43823 692 aaKnown RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 TPST1O60507 370 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 LYZL6O75951 148 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 AKR7A3O95154 331 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 LGI1O95970 557 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 CD3EP07766 207 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 CD53P19397 219 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 KLK2P20151 261 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 IGHV1-2P23083 117 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 HOXC12P31275 282 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 HOXC5Q00444 222 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 DMTNQ08495 405 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 VEZF1Q14119 521 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 OR1Q1Q15612 314 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 TAB1Q15750 504 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 STK11Q15831 433 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 CGB2Q6NT52 195 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 ADAM5Q6NVV9 412 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms