RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 KLHL14Q9P2G3 628 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 SLC22A2O15244 555 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 OR2T1O43869 369 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 RAMP1O60894 148 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 MFN2O95140 757 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 AKR7A3O95154 331 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 C8BP07358 591 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 IGHV1-2P23083 117 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 GTF2E2P29084 291 aaKnown RBP20.55■□□□□ 0.88
CHFR-222ENST00000544093 AQP1P29972 269 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 HOXC5Q00444 222 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 TSC22D1Q15714 1073 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 C1QTNF12Q5T7M4 302 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 TMEM225Q6GV28 225 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 OR7E24Q6IFN5 339 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 CASP12Q6UXS9 341 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 ZNF704Q6ZNC4 412 aaPredicted RBP20.55■□□□□ 0.88
CHFR-222ENST00000544093 PATL1Q86TB9 770 aaKnown RBP20.55■□□□□ 0.88
CHFR-222ENST00000544093 TMEM99Q8N816 258 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 OR8J3Q8NGG0 315 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 TMEM204Q9BSN7 226 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 UBTD1Q9HAC8 227 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 TMEM27Q9HBJ8 222 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 SAR1AQ9NR31 198 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 RASD1Q9Y272 281 aa20.55■□□□□ 0.88
CHFR-222ENST00000544093 TPST1O60507 370 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 EDNRAP25101 427 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 KLF10Q13118 480 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 CAPRIN1Q14444 709 aaKnown RBP20.54■□□□□ 0.88
CHFR-222ENST00000544093 ALG10BQ5I7T1 473 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 SWT1Q5T5J6 900 aaKnown RBP20.54■□□□□ 0.88
CHFR-222ENST00000544093 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.54■□□□□ 0.88
CHFR-222ENST00000544093 TGIF2LYQ8IUE0 185 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 ZNF433Q8N7K0 673 aaPredicted RBP20.54■□□□□ 0.88
CHFR-222ENST00000544093 PCYOX1LQ8NBM8 494 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 OR9K2Q8NGE7 335 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 RASSF5Q8WWW0 418 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 SLC47A1Q96FL8 570 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 UPB1Q9UBR1 384 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 RAI1Q7Z5J4 1906 aaPredicted RBP20.54■□□□□ 0.88
CHFR-222ENST00000544093 ROS1P08922 2347 aa20.54■□□□□ 0.88
CHFR-222ENST00000544093 DSCAMO60469 2012 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 A0A1B0GWA3 101 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 OR6C65A6NJZ3 312 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 FBP2O00757 339 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 FMO6PO60774 539 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 TMCC2O75069 709 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 HTR2AP28223 471 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 PCGF2P35227 344 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 MDH1P40925 334 aaKnown RBP20.53■□□□□ 0.88
CHFR-222ENST00000544093 TGFBR3Q03167 851 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 SELPLGQ14242 412 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 PPA1Q15181 289 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 STK11Q15831 433 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 CGB2Q6NT52 195 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 GPAT4Q86UL3 456 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 OR10A6Q8NH74 314 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 SLC38A4Q969I6 547 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 LRRC58Q96CX6 371 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 CCL19Q99731 98 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 RNF115Q9Y4L5 304 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 PRR14LQ5THK1 2151 aa20.53■□□□□ 0.88
CHFR-222ENST00000544093 CIB4A0PJX0 185 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 OR5H1A6NKK0 313 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 FZD7O75084 574 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 IGHV3-9P01782 118 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 CD3EP07766 207 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 DMTNQ08495 405 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 FAPQ12884 760 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 MFSD13AQ14CX5 517 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 GLIPR1L2Q4G1C9 344 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 NCMAPQ5T1S8 102 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 FAM69AQ5T7M9 428 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 ALKBH2Q6NS38 261 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 NANOGP8Q6NSW7 305 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 ADAM5Q6NVV9 412 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 AAED1Q7RTV5 226 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 ABHD12BQ7Z5M8 362 aaPredicted RBP20.52■□□□□ 0.88
CHFR-222ENST00000544093 LRRC75A-AS1Q8N1F1 130 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 POMGNT2Q8NAT1 580 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 C1orf162Q8NEQ5 155 aaPredicted RBP20.52■□□□□ 0.88
CHFR-222ENST00000544093 EPYCQ99645 322 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 RSPO3Q9BXY4 272 aaPredicted RBP20.52■□□□□ 0.88
CHFR-222ENST00000544093 NANOGQ9H9S0 305 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 GID8Q9NWU2 228 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 CAPN7Q9Y6W3 813 aa20.52■□□□□ 0.88
CHFR-222ENST00000544093 CCT8L1PA6NM43 557 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 FTCDNL1E5RQL4 147 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 M0QX08 132 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 MRASO14807 208 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 SMPD2O60906 423 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 LGI1O95970 557 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 NTF4P34130 210 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 RPS5P46782 204 aaKnown RBP20.51■□□□□ 0.87
CHFR-222ENST00000544093 P2RY4P51582 365 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 EGR4Q05215 589 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 VMACQ2NL98 169 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 COMTD1Q86VU5 262 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 OR6S1Q8NH40 331 aa20.51■□□□□ 0.87
CHFR-222ENST00000544093 SLC26A7Q8TE54 656 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms