RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SMAD6O43541 496 aaKnown RBP14.4□□□□□ -0.1
CHD4-210ENST00000544040 ADAMTS4O75173 837 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 PXNP49023 591 aaPredicted RBP14.4□□□□□ -0.1
CHD4-210ENST00000544040 RANBP10Q6VN20 620 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 IL34Q6ZMJ4 242 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 CBLL1Q75N03 491 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 FRMD1Q8N878 549 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 RHOXF1Q8NHV9 184 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 ZNF416Q9BWM5 594 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 C20orf202A1L168 122 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 SHC1P29353 583 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 MTCP1P56278 107 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 ZNF91Q05481 1191 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 SUMF1Q8NBK3 374 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 OR4A16Q8NH70 328 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 OR1E3Q8WZA6 343 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 TXLNGYQ9BZA5 131 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 GAB2Q9UQC2 676 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 RAB40ALP0C0E4 278 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 EMP3P54852 163 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 WBP2NLQ6ICG8 309 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 NAA40Q86UY6 237 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 RAB40AQ8WXH6 277 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 CLMPQ9H6B4 373 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 NOX4Q9NPH5 578 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 OR6C76A6NM76 312 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 OR2T1O43869 369 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 HTR4Q13639 388 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 STEAP3Q658P3 488 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 BCDIN3DQ7Z5W3 292 aaKnown RBP14.4□□□□□ -0.1
CHD4-210ENST00000544040 SKA3Q8IX90 412 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 SLC43A2Q8N370 569 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 CENPOQ9BU64 300 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 OR10J4P0C629 311 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 ANXA7P20073 488 aaKnown RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 HNRNPA2B1P22626 353 aaKnown RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 F2RL1P55085 397 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 CDONQ4KMG0 1287 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 FRMPD2BQ6IN97 320 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 MAMDC4Q6UXC1 1216 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 SLC41A2Q96JW4 573 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 ZNF582Q96NG8 517 aaPredicted RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 MMP12P39900 470 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 DAPP51397 102 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 RTL6Q6ICC9 239 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 FAM58AQ8N1B3 248 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 OR5L1Q8NGL2 311 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 RAB3CQ96E17 227 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 ULBP2Q9BZM5 246 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 SELENOIQ9C0D9 397 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 DYNLRB1Q9NP97 96 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 SLC45A1Q9Y2W3 748 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 PFKMP08237 780 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 RBMS3Q6XE24 437 aaKnown RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 HAVCR2Q8TDQ0 301 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 NKX3-1Q99801 234 aaPredicted RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 HIPK2Q9H2X6 1198 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 INPP5EQ9NRR6 644 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 EMCNQ9ULC0 261 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 AQP7O14520 342 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 DHRS4L1P0CG22 281 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 MAT1AQ00266 395 aaKnown RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 TBCEQ15813 527 aaPredicted RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 SLC36A2Q495M3 483 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 MRPL2Q5T653 305 aaKnown RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 OR13C9Q8NGT0 318 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 C2CD4CQ8TF44 421 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 BADQ92934 168 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 LMF2Q9BU23 707 aaKnown RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 MYOTQ9UBF9 498 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 PPLO60437 1756 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 TMEM72A0PK05 275 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 HNRNPA1P09651 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHD4-210ENST00000544040 PM20D1Q6GTS8 502 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 LRFN5Q96NI6 719 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 ZMAT3Q9HA38 289 aaKnown RBP14.39□□□□□ -0.11
CHD4-210ENST00000544040 MTCH1Q9NZJ7 389 aa14.39□□□□□ -0.11
CHD4-210ENST00000544040 ZNF816-ZNF321PA0A0X1KG74 233 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 CDHR4A6H8M9 788 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 ZFP92A6NM28 416 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 CLEC3BP05452 202 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 GABRA5P31644 462 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 MLF1P58340 268 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 FCN2Q15485 313 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 RPL22L1Q6P5R6 122 aaKnown RBP14.38□□□□□ -0.11
CHD4-210ENST00000544040 ZNF321PQ8N8H1 164 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 RNF170Q96K19 258 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 TUBB1Q9H4B7 451 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 LIN7BQ9HAP6 207 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 GMPR2Q9P2T1 348 aaKnown RBP14.38□□□□□ -0.11
CHD4-210ENST00000544040 MMP2P08253 660 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 HBA1P69905 142 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 ACSM1Q08AH1 577 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 SSX9Q7RTT3 188 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 OR4N2Q8NGD1 307 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 TSSK2Q96PF2 358 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 ANKRD19PQ9H560 264 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 CLDN24A6NM45 220 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 ALDOCP09972 364 aaKnown RBP14.38□□□□□ -0.11
CHD4-210ENST00000544040 CHRNB4P30926 498 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms