RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 IDH3BO43837 385 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 HIST1H1CP16403 213 aaKnown RBP17.98■□□□□ 0.47
COPS7A-218ENST00000543939 SLC2A5P22732 501 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 DLSTP36957 453 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 SSR4P51571 173 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 NFATC3Q12968 1075 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 CHAF1BQ13112 559 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 SNTA1Q13424 505 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 ARSKQ6UWY0 536 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 IL20RBQ6UXL0 311 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 SHFQ7M4L6 423 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 DND1Q8IYX4 353 aaKnown RBP17.98■□□□□ 0.47
COPS7A-218ENST00000543939 ASB15Q8WXK1 588 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 KISS1RQ969F8 398 aaPredicted RBP17.98■□□□□ 0.47
COPS7A-218ENST00000543939 SECISBP2Q96T21 854 aaKnown RBP17.98■□□□□ 0.47
COPS7A-218ENST00000543939 NPAS1Q99742 590 aa17.98■□□□□ 0.47
COPS7A-218ENST00000543939 RYDENQ9NUL5 291 aaKnown RBP17.98■□□□□ 0.47
COPS7A-218ENST00000543939 EXOSC1Q9Y3B2 195 aaKnown RBP17.98■□□□□ 0.47
COPS7A-218ENST00000543939 CCDC182A6NF36 153 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 M0R3G1 203 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 MYL12BO14950 172 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 RAD1O60671 282 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 FTH1P19P0C7X4 201 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 MYL12AP19105 171 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 TMED1Q13445 227 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 SPHARQ15513 63 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 C5orf46Q6UWT4 87 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 CYB561A3Q8NBI2 242 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 OR4F15Q8NGB8 312 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 OR52E2Q8NGJ4 325 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 OR4K13Q8NH42 304 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 FRMD6Q96NE9 622 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 KATNB1Q9BVA0 655 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 FAM117AQ9C073 453 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 RACGAP1Q9H0H5 632 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 P4HTMQ9NXG6 502 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 SLC6A5Q9Y345 797 aa17.97■□□□□ 0.47
COPS7A-218ENST00000543939 SPAARA0A1B0GVQ0 90 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 J3QRE1 110 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 MT-ATP6P00846 226 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 IGHA1P01876 353 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 CD14P08571 375 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 HSMCR30P0CW71 290 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 APEHP13798 732 aaKnown RBP17.96■□□□□ 0.47
COPS7A-218ENST00000543939 PAICSP22234 425 aaKnown RBP17.96■□□□□ 0.47
COPS7A-218ENST00000543939 APOBEC1P41238 236 aaKnown RBP17.96■□□□□ 0.47
COPS7A-218ENST00000543939 RGS6P49758 472 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 ERVK-25P63136 954 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.96■□□□□ 0.47
COPS7A-218ENST00000543939 ALG10Q5BKT4 473 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 SLC25A53Q5H9E4 307 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 ARMC4Q5T2S8 1044 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 C1orf140Q5VVS0 124 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 NANOGNBQ7Z5D8 188 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 OR2M3Q8NG83 312 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 NTNG2Q96CW9 530 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 OPALINQ96PE5 141 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 DDOQ99489 341 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 JAM3Q9BX67 310 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 WDFY3Q8IZQ1 3526 aa17.96■□□□□ 0.47
COPS7A-218ENST00000543939 TMEM129A0AVI4 362 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 SLC22A31A6NKX4 558 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 HIST1H2ABP04908 130 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 LIMS3P0CW19 117 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 LIMS4P0CW20 117 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 RPL18Q07020 188 aaKnown RBP17.95■□□□□ 0.46
COPS7A-218ENST00000543939 IL10RAQ13651 578 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 SPCS2Q15005 226 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 KLHL12Q53G59 568 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 FAM69AQ5T7M9 428 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 H3F3CQ6NXT2 135 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 HIST3H2AQ7L7L0 130 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 MAMDC2Q7Z304 686 aaPredicted RBP17.95■□□□□ 0.46
COPS7A-218ENST00000543939 FAM122BQ7Z309 247 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 GALNT15Q8N3T1 639 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 FADS6Q8N9I5 356 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 FAM98AQ8NCA5 519 aaKnown RBP17.95■□□□□ 0.46
COPS7A-218ENST00000543939 SDR9C7Q8NEX9 313 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 HIST1H2ACQ93077 130 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 TEAD3Q99594 435 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 SH2D2AQ9NP31 389 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 KLHL1Q9NR64 748 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 CHCHD3Q9NX63 227 aaKnown RBP17.95■□□□□ 0.46
COPS7A-218ENST00000543939 TNFRSF10DQ9UBN6 386 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 EP300Q09472 2414 aaPredicted RBP17.95■□□□□ 0.46
COPS7A-218ENST00000543939 LOC101059948A0A1B0GTJ6 334 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 SLC22A1O15245 554 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 AHCYL1O43865 530 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 SCG5P05408 212 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 SERPINA7P05543 415 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 CLUP10909 449 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 PEX19P40855 299 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 FOXF1Q12946 379 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 C1DQ13901 141 aaKnown RBP17.95■□□□□ 0.46
COPS7A-218ENST00000543939 INPP5JQ15735 1006 aaPredicted RBP17.95■□□□□ 0.46
COPS7A-218ENST00000543939 TSTQ16762 297 aaKnown RBP17.95■□□□□ 0.46
COPS7A-218ENST00000543939 PLPPR5Q32ZL2 321 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 C19orf48Q6RUI8 117 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 B3GLCTQ6Y288 498 aa17.95■□□□□ 0.46
COPS7A-218ENST00000543939 SIRT6Q8N6T7 355 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms