RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MPIP34949 423 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 CASP6P55212 293 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 PPIAP62937 165 aaKnown RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 CRMP1Q14194 572 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 C9orf64Q5T6V5 341 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 KHDRBS2Q5VWX1 349 aaKnown RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 NDUFAF7Q7L592 441 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 TRAPPC5Q8IUR0 188 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 GTF3AQ92664 365 aaKnown RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 ZDHHC12Q96GR4 267 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 PPP1R16AQ96I34 528 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 MACROD1Q9BQ69 325 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 MRPL17Q9NRX2 175 aaKnown RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 ACSS1Q9NUB1 689 aaPredicted RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 SPG21Q9NZD8 308 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 SCN8AQ9UQD0 1980 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 ACOT7O00154 380 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 CCSO14618 274 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 CKMP06732 381 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 LIPCP11150 499 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 GATMP50440 423 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 TMEM115Q12893 351 aaPredicted RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 OR2B11Q5JQS5 317 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 THSD4Q6ZMP0 1018 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 SLC36A1Q7Z2H8 476 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 KISS1RQ969F8 398 aaPredicted RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 CD180Q99467 661 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 PLEKHA1Q9HB21 404 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 ZNF334Q9HCZ1 680 aaPredicted RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 NRIP3Q9NQ35 241 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 A0A1W2PS29 197 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 SLC22A31A6NKX4 558 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 IFITM5A6NNB3 132 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 ITPKBP27987 946 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 OR1D2P34982 312 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 SOX2P48431 317 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 POU3F4P49335 361 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 KLHL26Q53HC5 615 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 FAM109BQ6ICB4 259 aaPredicted RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 MBOAT2Q6ZWT7 520 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 ARL14EPQ8N8R7 260 aaPredicted RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 OR9A1PQ8NGU1 263 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 PFN4Q8NHR9 129 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 LYSMD1Q96S90 227 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 GPR174Q9BXC1 333 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 C1QTNF2Q9BXJ5 285 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 KLF16Q9BXK1 252 aaPredicted RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 SLC38A1Q9H2H9 487 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 FOXJ3Q9UPW0 622 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 SLC45A1Q9Y2W3 748 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 RFPL4AA6NLU0 287 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 OR2AT4A6NND4 320 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 RFPL4AL1F8VTS6 287 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 ICOSLGO75144 302 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 GTF2F2P13984 249 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 AKR1C3P42330 323 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 NR0B1P51843 470 aaKnown RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 FOXK2Q01167 660 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 GUCA2AQ02747 115 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 Q6ZVU0 165 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 NAA40Q86UY6 237 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 SERINC5Q86VE9 423 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 ARL6IP6Q8N6S5 226 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 AMDHD1Q96NU7 426 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 C8orf33Q9H7E9 229 aaPredicted RBP11.68□□□□□ -0.54
SMG8-202ENST00000543872 C20orf141Q9NUB4 165 aa11.68□□□□□ -0.54
SMG8-202ENST00000543872 TRAV27A0A087WT01 109 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 TRAV14DV4A0A0A6YYC5 116 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 SLC5A10A0PJK1 596 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 TMEM82A0PJX8 343 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 IDSB3KWA1 339 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 OR2T1O43869 369 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 FBP1P09467 338 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 IL9P15248 144 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 BSGP35613 385 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 RIDAP52758 137 aaKnown RBP11.67□□□□□ -0.54
SMG8-202ENST00000543872 TAS2R20P59543 309 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 RAB5BP61020 215 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 ZNF234Q14588 700 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 DECR1Q16698 335 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 MICBQ29980 383 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 PRAMEF14Q5SWL7 426 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 OLFML2AQ68BL7 652 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 FAM122BQ7Z309 247 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 OR13C2Q8NGS9 318 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 UBE2E3Q969T4 207 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 PELI1Q96FA3 418 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 CPEB1Q9BZB8 566 aaKnown RBP11.67□□□□□ -0.54
SMG8-202ENST00000543872 ADGRL4Q9HBW9 690 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 MRPS30Q9NP92 439 aaKnown RBP11.67□□□□□ -0.54
SMG8-202ENST00000543872 UFSP2Q9NUQ7 469 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 SIDT1Q9NXL6 827 aaKnown RBP11.67□□□□□ -0.54
SMG8-202ENST00000543872 OR5V1Q9UGF6 321 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 TAC3Q9UHF0 121 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 ST6GALNAC2Q9UJ37 374 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 BRCA2P51587 3418 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
SMG8-202ENST00000543872 PLXNA3P51805 1871 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms