RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 CCNL2Q96S94 520 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 SLC17A9Q9BYT1 436 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 NMNAT2Q9BZQ4 307 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 SRMSQ9H3Y6 488 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 NOX4Q9NPH5 578 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 MKKSQ9NPJ1 570 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 FBXO34Q9NWN3 711 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 USP36Q9P275 1121 aaKnown RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 MOSPD1Q9UJG1 213 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 GNG8Q9UK08 70 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 PILRAQ9UKJ1 303 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ACOT7O00154 380 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 PLRG1O43660 514 aaKnown RBP12.6□□□□□ -0.39
VPS33A-208ENST00000543633 GMDSO60547 372 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 OR2A4O95047 310 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 SYPP08247 313 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 HIST1H1CP16403 213 aaKnown RBP12.6□□□□□ -0.39
VPS33A-208ENST00000543633 ENPP1P22413 925 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 MAPK3P27361 379 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-208ENST00000543633 ACAA2P42765 397 aaKnown RBP12.6□□□□□ -0.39
VPS33A-208ENST00000543633 VEGFCP49767 419 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 PPP2CBP62714 309 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 PPP2CAP67775 309 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 CRYZQ08257 329 aaKnown RBP12.6□□□□□ -0.39
VPS33A-208ENST00000543633 GPM6BQ13491 265 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 TCTE1Q5JU00 501 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 ULK3Q6PHR2 472 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 DNM1P46Q6ZS02 220 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 ESPNLQ6ZVH7 1005 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 PRSS45Q7RTY3 260 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 KCTD20Q7Z5Y7 419 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 SDR9C7Q8NEX9 313 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 OR52I2Q8NH67 350 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 CEP76Q8TAP6 659 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 ASB12Q8WXK4 309 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
VPS33A-208ENST00000543633 SGTBQ96EQ0 304 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 OR2A7Q96R45 310 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 GPX7Q96SL4 187 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-208ENST00000543633 LMF2Q9BU23 707 aaKnown RBP12.6□□□□□ -0.39
VPS33A-208ENST00000543633 PBX4Q9BYU1 374 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 V9GY05 133 aa12.6□□□□□ -0.39
VPS33A-208ENST00000543633 ARPC4-TTLL3A0A0A6YYG9 625 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 PLSCR5A0PG75 271 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 FGF17O60258 216 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 CREBL2O60519 120 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-208ENST00000543633 IGF2P01344 180 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 NGFRP08138 427 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 ZP3P21754 424 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 PRKACBP22694 351 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 SSTR2P30874 369 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 GABRA3P34903 492 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 GJA4P35212 333 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 PTH2RP49190 550 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 PSMD4P55036 377 aaKnown RBP12.59□□□□□ -0.39
VPS33A-208ENST00000543633 C2orf27AQ580R0 203 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 NHLRC3Q5JS37 347 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 ZNF626Q68DY1 528 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 FIGNL1Q6PIW4 674 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 FIGLAQ6QHK4 219 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 FAM198BQ6UWH4 519 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 HAVCR1Q96D42 359 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 S100A16Q96FQ6 103 aaKnown RBP12.59□□□□□ -0.39
VPS33A-208ENST00000543633 DERL3Q96Q80 235 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 DDOQ99489 341 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 GFI1Q99684 422 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 FGF22Q9HCT0 170 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 ANKRD10Q9NXR5 420 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 ACTR10Q9NZ32 417 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 MGAT4CQ9UBM8 478 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 FOXJ3Q9UPW0 622 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 DOCK9Q9BZ29 2069 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 A0A1W2PQU0 124 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 hCG_1807616A0A1W2PRN6 198 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 OR2M5A3KFT3 312 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 CCDC85CA6NKD9 419 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 CYR61O00622 381 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 PIN1P1O15428 100 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 KHDRBS3O75525 346 aaKnown RBP12.59□□□□□ -0.39
VPS33A-208ENST00000543633 APODP05090 189 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-208ENST00000543633 SNRPNP63162 240 aaKnown RBP12.59□□□□□ -0.39
VPS33A-208ENST00000543633 RUNX3Q13761 415 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 ZNF141Q15928 474 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 FCRL6Q6DN72 434 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 PWWP2BQ6NUJ5 590 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 LRRN1Q6UXK5 716 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 Q6ZTK2 550 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 SYT9Q86SS6 491 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 OR4K13Q8NH42 304 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 ASB13Q8WXK3 278 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 MIB2Q96AX9 1013 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 ZFYVE21Q9BQ24 234 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 ORAI3Q9BRQ5 295 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 RBCK1Q9BYM8 510 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 SLC19A3Q9BZV2 496 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 SLITRK2Q9H156 845 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 PPA2Q9H2U2 334 aa12.59□□□□□ -0.39
VPS33A-208ENST00000543633 CERS4Q9HA82 394 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms