RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PGM2L1Q6PCE3 622 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 XKRXQ6PP77 449 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 MAMDC2Q7Z304 686 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 AQP12AQ8IXF9 295 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 OFCC1Q8IZS5 231 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 SLC43A2Q8N370 569 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 MARVELD2Q8N4S9 558 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 ZNF808Q8N4W9 903 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 TMEM99Q8N816 258 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 PIK3C3Q8NEB9 887 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 MFSD8Q8NHS3 518 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 MBD3L2Q8NHZ7 208 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 PIGXQ8TBF5 258 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 TMEM255BQ8WV15 326 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 TAAR8Q969N4 342 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 ZNF775Q96BV0 537 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 GMPPAQ96IJ6 420 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 ZNF300Q96RE9 604 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 UCN2Q96RP3 112 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 DMRTA2Q96SC8 542 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 PIP5K1AQ99755 562 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 TMEM43Q9BTV4 400 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 MAGIXQ9H6Y5 334 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 C12orf49Q9H741 205 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 YY1AP1Q9H869 796 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 NANSQ9NR45 359 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 GLRX2Q9NS18 164 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 EMC3Q9P0I2 261 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 KLHL9Q9P2J3 617 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 Q9UFV3 132 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 A4GNTQ9UNA3 340 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 PROCRQ9UNN8 238 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 CFAP46Q8IYW2 2715 aa5.65□□□□□ -1.51
LTBR-212ENST00000543542 A0A1W2PNV4 684 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 TCRBV5S2A0A599 114 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ERICH4A6NGS2 130 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ENO4A6NNW6 628 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 LRRN3E7EW58 273 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 C11orf98E9PRG8 122 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 M0R082 166 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 TNFRSF11BO00300 401 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 GPR171O14626 319 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 SMAD9O15198 467 aaKnown RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 PIP5K1CO60331 668 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 CYTIPO60759 359 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 SERPINI2O75830 405 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 TOXO94900 526 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 CLDN14O95500 239 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 MT-ATP6P00846 226 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 CST1P01037 141 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 LDLRP01130 860 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 THY1P04216 161 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 CRHP06850 196 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 YES1P07947 543 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ADORA3P0DMS8 318 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ZNF43P17038 809 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 HOXB6P17509 224 aaKnown RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 GRPRP30550 384 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 CEACAM8P31997 349 aaPredicted RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 UGT2B15P54855 530 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 EGR4Q05215 589 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 FOXF2Q12947 444 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ESPL1Q14674 2120 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 TAF11Q15544 211 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 PAQR6Q6TCH4 344 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 LINC00114Q6XXX2 140 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 WDR88Q6ZMY6 472 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 SEM1Q6ZVN7 128 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 H1FNTQ75WM6 255 aaPredicted RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 ASRGL1Q7L266 308 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 FAM214BQ7L5A3 538 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 NANOGNBQ7Z5D8 188 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ADGRE4PQ86SQ3 457 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 LUZP2Q86TE4 346 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 STK32CQ86UX6 486 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 TSPYL5Q86VY4 417 aaPredicted RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 CCDC103Q8IW40 242 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 TUSC5Q8IXB3 177 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ZNF100Q8IYN0 542 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 UBE2J2Q8N2K1 259 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 NAXEQ8NCW5 288 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 PFN4Q8NHR9 129 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ZNF417Q8TAU3 575 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 RNF128Q8TEB7 428 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ABHD3Q8WU67 409 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 CANT1Q8WVQ1 401 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ACOT11Q8WXI4 607 aaPredicted RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 SGTBQ96EQ0 304 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 C7orf34Q96L11 122 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 ZNF587Q96SQ5 575 aaPredicted RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 PRSS27Q9BQR3 290 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 TACO1Q9BSH4 297 aaKnown RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 SFXN3Q9BWM7 321 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 CHID1Q9BWS9 393 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 SLC19A3Q9BZV2 496 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 NDEL1Q9GZM8 345 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 REEP1Q9H902 201 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 RNF122Q9H9V4 155 aa5.64□□□□□ -1.51
LTBR-212ENST00000543542 NMNAT1Q9HAN9 279 aaPredicted RBP5.64□□□□□ -1.51
LTBR-212ENST00000543542 CHST11Q9NPF2 352 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms