RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	FAM234B	A2RU67	622 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	MBD3L3	A6NE82	208 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	FRG2C	A6NGY1	282 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324		E9PQ18	207 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324		G3V2T6	193 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	SYT5	O00445	386 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	AZIN1	O14977	448 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	SHOX	O15266	292 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	PLOD3	O60568	738 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TSPAN2	O60636	221 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	UGT2B17	O75795	530 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ANGPTL1	O95841	491 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	EPPIN	O95925	133 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	APOA1	P02647	267 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	CT45A8	P0DMV1	189 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	CT45A9	P0DMV2	189 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	PEPD	P12955	493 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	GGT1	P19440	569 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	CSNK2A2	P19784	350 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	DRD5	P21918	477 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	NR4A1	P22736	598 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	PRPH2	P23942	346 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	RRM2	P31350	389 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TIA1	P31483	386 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	UQCRC1	P31930	480 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TIMP3	P35625	211 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	PPIC	P45877	212 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	HTR3A	P46098	478 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	GSTM5	P46439	218 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	RPS5	P46782	204 aa	Known RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	GAS1	P54826	345 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	UGT2B15	P54855	530 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	FOXA1	P55317	472 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TPD52	P55327	224 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	GFRA1	P56159	465 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ACTG1	P63261	375 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TEK	Q02763	1124 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	CDK5R2	Q13319	367 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	SNTA1	Q13424	505 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	EXOSC7	Q15024	291 aa	Known RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	IMPG1	Q17R60	797 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	PRSS53	Q2L4Q9	553 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	SLC25A35	Q3KQZ1	300 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TRMT12	Q53H54	448 aa	Known RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	SPIN4	Q56A73	249 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	YIF1B	Q5BJH7	314 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	CT45A2	Q5DJT8	189 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	XKR7	Q5GH72	579 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ATAD3C	Q5T2N8	411 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TIGD3	Q6B0B8	471 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	GLYAT	Q6IB77	296 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	DESI1	Q6ICB0	168 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	CCBE1	Q6UXH8	406 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	NPSR1	Q6W5P4	371 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	GPRIN3	Q6ZVF9	776 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TRIM46	Q7Z4K8	759 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	STK32C	Q86UX6	486 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ZBTB46	Q86UZ6	589 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	UBQLNL	Q8IYU4	475 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ARIH2OS	Q8N7S6	290 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	CDYL2	Q8N8U2	506 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	NUP43	Q8NFH3	380 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	OR8J3	Q8NGG0	315 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	OR5M3	Q8NGP4	307 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TWIST2	Q8WVJ9	160 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	SELENOM	Q8WWX9	145 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	DIO2	Q92813	273 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	SLC38A4	Q969I6	547 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	LGALS12	Q96DT0	336 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF764	Q96H86	408 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	FCRL1	Q96LA6	429 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	C3orf30	Q96M34	536 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	RNF145	Q96MT1	663 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	HBEGF	Q99075	208 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TIMP4	Q99727	224 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	APOL4	Q9BPW4	351 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	DOHH	Q9BU89	302 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	G6PC3	Q9BUM1	346 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	GON7	Q9BXV9	100 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ELOVL6	Q9H5J4	265 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ACOT13	Q9NPJ3	140 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ABCB10	Q9NRK6	738 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	SCN3B	Q9NY72	215 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	TAS2R7	Q9NYW3	318 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	AHSP	Q9NZD4	102 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	JKAMP	Q9P055	326 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	VPS29	Q9UBQ0	182 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	B4GALT7	Q9UBV7	327 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	ING1	Q9UK53	422 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	GPR55	Q9Y2T6	319 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	PEX16	Q9Y5Y5	336 aa		5.78	□□□□□ -1.48
CIT-213	ENST00000543324	HEATR5A	Q86XA9	2040 aa		5.77	□□□□□ -1.49
CIT-213	ENST00000543324		A0A075B6Q4	140 aa		5.77	□□□□□ -1.49
CIT-213	ENST00000543324		A0A087WV62	115 aa		5.77	□□□□□ -1.49
CIT-213	ENST00000543324	HMX3	A6NHT5	357 aa		5.77	□□□□□ -1.49
CIT-213	ENST00000543324	OR6C70	A6NIJ9	312 aa		5.77	□□□□□ -1.49
CIT-213	ENST00000543324	CD8B2	A6NJW9	211 aa		5.77	□□□□□ -1.49
CIT-213	ENST00000543324	CENPX	A8MT69	81 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms