RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 TBC1D3EA0A087X179 549 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 ACOD1A6NK06 481 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 RIIAD1A6NNX1 92 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TBC1D3LB9A6J9 549 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 H3BSH0 61 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 J3QRE1 110 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 ERI3O43414 337 aaKnown RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 NDUFA2O43678 99 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 WDPCPO95876 746 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SERPINA3P01011 423 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 CTSLP07711 333 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 FGF2P09038 288 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TBC1D3HP0C7X1 549 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SFTPCP11686 197 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SRFP11831 508 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 GABRA1P14867 456 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 IL9P15248 144 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 MAKP20794 623 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 FRKP42685 505 aaPredicted RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 STARP49675 285 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PRR5P85299 388 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 ZNF85Q03923 595 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 CRMP1Q14194 572 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 UBE2NLQ5JXB2 153 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 FAM74A1Q5RGS3 127 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TMEM69Q5SWH9 247 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 ZNF776Q68DI1 518 aaPredicted RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TBC1D3GQ6DHY5 549 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TBC1D3CQ6IPX1 549 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 UBE3DQ7Z6J8 389 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 CDK20Q8IZL9 346 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TBC1D3Q8IZP1 549 aaPredicted RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 RFLNBQ8N5W9 214 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 FAM71CQ8NEG0 241 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 OR13C2Q8NGS9 318 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 OR9A2Q8NGT5 310 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 OR14C36Q8NHC7 312 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 BRIX1Q8TDN6 353 aaKnown RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TNFAIP8L1Q8WVP5 186 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SGK3Q96BR1 496 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 CNRIP1Q96F85 164 aaPredicted RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PEX11GQ96HA9 241 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PGLYRP3Q96LB9 341 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 HS6ST2Q96MM7 605 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PRDM9Q9NQV7 894 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SDHAF3Q9NRP4 125 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 C20orf141Q9NUB4 165 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 EMC3Q9P0I2 261 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 GNG8Q9UK08 70 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 GMEB2Q9UKD1 530 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 MRTO4Q9UKD2 239 aaKnown RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 MYOFQ9NZM1 2061 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 ANKRD61A6NGH8 418 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 H7C2Y5 167 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 DNASE2O00115 360 aaPredicted RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SYT5O00445 386 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 TBX19O60806 448 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 MOSPD3O75425 235 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PPP1R3DO95685 299 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 LDOC1O95751 146 aaPredicted RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 HIST1H2ABP04908 130 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 CSNK2A2P19784 350 aaPredicted RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 GMFBP60983 142 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 GABREP78334 506 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SORDQ00796 357 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 MC2RQ01718 297 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 LTB4RQ15722 352 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SMAD2Q15796 467 aaKnown RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 NDUFAF6Q330K2 333 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 BAIAP2L2Q6UXY1 529 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 THSD4Q6ZMP0 1018 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 ZNF793Q6ZN11 406 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 HIST3H2AQ7L7L0 130 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PXKQ7Z7A4 578 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PAQR7Q86WK9 346 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 OR56A1Q8NGH5 318 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 OR1S1Q8NH92 325 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 SYNPRQ8TBG9 265 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 HAVCR2Q8TDQ0 301 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 HIST1H2ACQ93077 130 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 MRPS24Q96EL2 167 aaKnown RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 S100A16Q96FQ6 103 aaKnown RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 LRIG1Q96JA1 1093 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 RPP25Q9BUL9 199 aaKnown RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 MFFQ9GZY8 342 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 XKR8Q9H6D3 395 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 NOX4Q9NPH5 578 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 IL36AQ9UHA7 158 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PLCL2Q9UPR0 1127 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PRELID3BQ9Y3B1 194 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 ATG4BQ9Y4P1 393 aa4.9□□□□□ -1.63
KDM3B-209ENST00000542866 PCDHGA9Q9Y5G4 932 aaKnown RBP4.9□□□□□ -1.63
KDM3B-209ENST00000542866 KIAA1671Q9BY89 1806 aa4.89□□□□□ -1.63
KDM3B-209ENST00000542866 BRCA2P51587 3418 aa4.89□□□□□ -1.63
KDM3B-209ENST00000542866 NPIPA5A0A0B4J1W7 369 aa4.89□□□□□ -1.63
KDM3B-209ENST00000542866 MEIS3P1A6NDR6 274 aa4.89□□□□□ -1.63
KDM3B-209ENST00000542866 NAP1L6A6NFF2 107 aa4.89□□□□□ -1.63
KDM3B-209ENST00000542866 ZNF98A6NK75 572 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms