RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 AQP7P3A6NL99 342 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 ELOA3DA6NLF2 546 aaPredicted RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 CPSF4LA6NMK7 179 aaKnown RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 DEFB108AA8MXU0 73 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 FAM220BPB1ANY3 271 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 LRRN3E7EW58 273 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 DNPH1O43598 174 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 EIF1BO60739 113 aaKnown RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 HRGP04196 525 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 GPIP06744 558 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 LOXP28300 417 aaPredicted RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 PEX19P40855 299 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 OR1E2P47887 323 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 NUDT2P50583 147 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 PSME3P61289 254 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 ELOA3BQ3SY89 546 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 CYBRD1Q53TN4 286 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 OTUD3Q5T2D3 398 aaPredicted RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 FAM91A1Q658Y4 838 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 PAQR6Q6TCH4 344 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 NHLRC1Q6VVB1 395 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 HACD2Q6Y1H2 254 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 BEND4Q6ZU67 534 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 GALNT5Q7Z7M9 940 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 BHLHE22Q8NFJ8 381 aaPredicted RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 ELOA3Q8NG57 546 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 OR2T12Q8NG77 320 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 MFSD8Q8NHS3 518 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 DNAJA4Q8WW22 397 aaPredicted RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 SLC25A36Q96CQ1 311 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 CMTM5Q96DZ9 223 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 ZC3HAV1LQ96H79 300 aaKnown RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 ZNF385AQ96PM9 386 aaKnown RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 HOPXQ9BPY8 73 aaPredicted RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 NAA11Q9BSU3 229 aaPredicted RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 NSRP1Q9H0G5 558 aaKnown RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 C12orf10Q9HB07 376 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 TMEM27Q9HBJ8 222 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 ADPRHL2Q9NX46 363 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 RPS6KB2Q9UBS0 482 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 TESQ9UGI8 421 aaKnown RBP8.61□□□□□ -1.03
YBX3-212ENST00000542002 ARL2BPQ9Y2Y0 163 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 SH3GLB1Q9Y371 365 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 FLVCR1Q9Y5Y0 555 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 VPS13CQ709C8 3753 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 ABCA12Q86UK0 2595 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 MS4A18H0YCH9 400 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 KLF4O43474 513 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 FMO6PO60774 539 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 FZD7O75084 574 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 BGLAPP02818 100 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 PNMTP11086 282 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 PSMB1P20618 241 aaKnown RBP8.6□□□□□ -1.03
YBX3-212ENST00000542002 CBLP22681 906 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 IGHV1-2P23083 117 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 PRDX6P30041 224 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 GSK3BP49841 420 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 LGALS3BPQ08380 585 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 POU4F3Q15319 338 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 MS4A18Q3C1V0 323 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 SFRP5Q5T4F7 317 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 INTS11Q5TA45 600 aaKnown RBP8.6□□□□□ -1.03
YBX3-212ENST00000542002 ERICH5Q6P6B1 374 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 Q6ZT83 130 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 CREB3L2Q70SY1 520 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 TSEN54Q7Z6J9 526 aaKnown RBP8.6□□□□□ -1.03
YBX3-212ENST00000542002 VTCN1Q7Z7D3 282 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 STK32CQ86UX6 486 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 RANBP3LQ86VV4 465 aaPredicted RBP8.6□□□□□ -1.03
YBX3-212ENST00000542002 TMEM200AQ86VY9 491 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 CARM1Q86X55 608 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 CDC20BQ86Y33 519 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 EPHX4Q8IUS5 362 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 WDFY1Q8IWB7 410 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 FITM2Q8N6M3 262 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 ANKS4BQ8N8V4 417 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 OR9K2Q8NGE7 335 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 PIGXQ8TBF5 258 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 SLC26A7Q8TE54 656 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 ADAMTS16Q8TE57 1224 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 S100PBPQ96BU1 408 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 ZHX1-C8orf76Q96EF9 292 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 SLC47A1Q96FL8 570 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 MOGAT1Q96PD6 335 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 PRSS27Q9BQR3 290 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 POLDIP3Q9BY77 421 aaKnown RBP8.6□□□□□ -1.03
YBX3-212ENST00000542002 ACTR6Q9GZN1 396 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 PCDHAC1Q9H158 963 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 CLEC4MQ9H2X3 399 aaPredicted RBP8.6□□□□□ -1.03
YBX3-212ENST00000542002 PLEKHF2Q9H8W4 249 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 B3GAT1Q9P2W7 334 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 ABCD2Q9UBJ2 740 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 NDRG3Q9UGV2 375 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 SLC13A4Q9UKG4 626 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 ADAM21Q9UKJ8 722 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 GPR52Q9Y2T5 361 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 NOSIPQ9Y314 301 aaKnown RBP8.6□□□□□ -1.03
YBX3-212ENST00000542002 SNX13Q9Y5W8 968 aa8.6□□□□□ -1.03
YBX3-212ENST00000542002 HRNRQ86YZ3 2850 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms