RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 ALKBH2Q6NS38 261 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 C3orf33Q6P1S2 294 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 CBLL1Q75N03 491 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 BTLAQ7Z6A9 289 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 COMTD1Q86VU5 262 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 UBQLNLQ8IYU4 475 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 OR52E4Q8NGH9 312 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 OR5M1Q8NGP8 315 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 LZICQ8WZA0 190 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 FIG4Q92562 907 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC7A6OSQ96CW6 309 aaPredicted RBP7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 STARD4Q96DR4 205 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 UCN2Q96RP3 112 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 ARHGDIGQ99819 225 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 ADAM19Q9H013 955 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 MUC13Q9H3R2 512 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 GORASP2Q9H8Y8 452 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 SERINC1Q9NRX5 453 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 ADPRHL2Q9NX46 363 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 PAQR5Q9NXK6 330 aaPredicted RBP7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 TESQ9UGI8 421 aaKnown RBP7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 MAGEL2Q9UJ55 1249 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC9A8Q9Y2E8 581 aa7.76□□□□□ -1.17
CLSTN3-212ENST00000541770 GJE1A6NN92 205 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 H3BML4 177 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 C16orf97H3BN30 126 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ADAMDEC1O15204 470 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 GYG2O15488 501 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 PHF1O43189 567 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 FRS3O43559 492 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 EFNA2O43921 213 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 PLAUP00749 431 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 PRG2P13727 222 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 CLK1P49759 484 aaKnown RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 POLR2HP52434 150 aaKnown RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 CLDN15P56746 228 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 RGS8P57771 180 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 NCALDP61601 193 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 MERTKQ12866 999 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 BNIP2Q12982 314 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 CEACAM7Q14002 265 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 CHRFAM7AQ494W8 412 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 CYBRD1Q53TN4 286 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 PPP4R4Q6NUP7 873 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF474Q6S9Z5 364 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF704Q6ZNC4 412 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ESPNLQ6ZVH7 1005 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF771Q7L3S4 317 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ADGRE4PQ86SQ3 457 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 GGNQ86UU5 652 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 RANBP3LQ86VV4 465 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ADGRG3Q86Y34 549 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 LILRA2Q8N149 483 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 RNF148Q8N7C7 305 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC25A43Q8WUT9 341 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 PROX1Q92786 737 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 FAM162AQ96A26 154 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF845Q96IR2 970 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ADGRG7Q96K78 797 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 BTBD10Q9BSF8 475 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 TRIM2Q9C040 744 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 POLR2J2Q9GZM3 115 aaKnown RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 PCDHAC1Q9H158 963 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 POLR2J3Q9H1A7 115 aaKnown RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 C12orf10Q9HB07 376 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 CTPS2Q9NRF8 586 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 DCAF13Q9NV06 445 aaKnown RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 ELOVL5Q9NYP7 299 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 CHRNA9Q9UGM1 479 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 EGFL7Q9UHF1 273 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 OSGIN1Q9UJX0 560 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 RPS6KA6Q9UK32 745 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 LAMP3Q9UQV4 416 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 SNX13Q9Y5W8 968 aa7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 SPIN1Q9Y657 262 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-212ENST00000541770 TMED7-TICAM2A0A0A6YYA0 188 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC22A20A6NK97 555 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 M0R3H8 397 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 ARPC2O15144 300 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 SEC14L5O43304 696 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF208O43345 1280 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 TPST2O60704 377 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 SERPINA1P01009 418 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 NCK1P16333 377 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 TCN1P20061 433 aaPredicted RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 IL11P20809 199 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 HTR2AP28223 471 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 TACR3P29371 465 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 CCKARP32238 428 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 SUCLG1P53597 346 aaKnown RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 CLDN20P56880 219 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 RPS3AP61247 264 aaKnown RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 HOXC5Q00444 222 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 TRIM25Q14258 630 aaKnown RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 NPTX1Q15818 432 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 CTU2Q2VPK5 515 aaKnown RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 SYT14P1Q58G82 188 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 PDSS1Q5T2R2 415 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 SWT1Q5T5J6 900 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms