RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 HHATLQ9HCP6 504 aa25.12■■□□□ 1.61
CCM2-218ENST00000541586 SPENQ96T58 3664 aaKnown RBP25.11■■□□□ 1.61
CCM2-218ENST00000541586 TMED7-TICAM2A0A0A6YYA0 188 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 TRIM64CA6NLI5 447 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 PTGES3LE9PB15 166 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 PRKYO43930 277 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 OR7A10O76100 309 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 BMP7P18075 431 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 HTR3AP46098 478 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 PGGHGQ32M88 737 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 ZBED5Q49AG3 693 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 THSD4Q6ZMP0 1018 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 OR2M3Q8NG83 312 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 OR52L1Q8NGH7 329 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 NTNG2Q96CW9 530 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 KTI12Q96EK9 354 aaPredicted RBP25.11■■□□□ 1.61
CCM2-218ENST00000541586 UBL7Q96S82 380 aaPredicted RBP25.11■■□□□ 1.61
CCM2-218ENST00000541586 UBQLN3Q9H347 655 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 MCCC2Q9HCC0 563 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 MED17Q9NVC6 651 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 SCN3BQ9NY72 215 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 VDAC3Q9Y277 283 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 TMED7Q9Y3B3 224 aa25.11■■□□□ 1.61
CCM2-218ENST00000541586 TNFSF12-TNFSF13A0A0A6YY99 330 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 DPPA5A6NC42 116 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 KLRC4-KLRK1H3BQV0 150 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 FAM20BO75063 409 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 RFC3P40938 356 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 CSNK2BP67870 215 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 EFNB1P98172 346 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 SNAPC1Q16533 368 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 FADS6Q8N9I5 356 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 SLC39A7Q92504 469 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 NPAS1Q99742 590 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 FBXL2Q9UKC9 423 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 TPRKBQ9Y3C4 175 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 PCDHGB6Q9Y5F9 930 aa25.1■■□□□ 1.61
CCM2-218ENST00000541586 SUSD5O60279 629 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 MASP1P48740 699 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 SLC9A3P48764 834 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 MEOX1P50221 254 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 ZNF41P51814 821 aaPredicted RBP25.09■■□□□ 1.61
CCM2-218ENST00000541586 DLX5P56178 289 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 ZNF74Q16587 644 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 ZNF773Q6PK81 442 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 PNPLA2Q96AD5 504 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 SLC38A2Q96QD8 506 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 RHNO1Q9BSD3 238 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 PLCXD1Q9NUJ7 323 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 CLN6Q9NWW5 311 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 TMEM72A0PK05 275 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 PINLYPA6NC86 204 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 ETV2O00321 342 aaPredicted RBP25.09■■□□□ 1.61
CCM2-218ENST00000541586 TLX2O43763 284 aaPredicted RBP25.09■■□□□ 1.61
CCM2-218ENST00000541586 NUDT6P53370 316 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 OR2M7Q8NG81 312 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 OR4K17Q8NGC6 315 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 FAM173AQ9BQD7 235 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 TEX12Q9BXU0 123 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 PRRG3Q9BZD7 231 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 DUSP21Q9H596 190 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 ZNF337Q9Y3M9 751 aa25.09■■□□□ 1.61
CCM2-218ENST00000541586 ATRXP46100 2492 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 MPDZO75970 2070 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 ANKRD33BA6NCL7 494 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 A6NHS1 94 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 BHLHE40O14503 412 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 HTR1AP08908 422 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 RPL5P46777 297 aaKnown RBP25.08■■□□□ 1.61
CCM2-218ENST00000541586 SLC35A2P78381 396 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 PMP22Q01453 160 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 PIGFQ07326 219 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 TMEM201Q5SNT2 666 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 PLCZ1Q86YW0 608 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 C10orf53Q8N6V4 93 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 ZNF540Q8NDQ6 660 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 TAAR8Q969N4 342 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 MOGAT1Q96PD6 335 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 AMBNQ9NP70 447 aa25.08■■□□□ 1.61
CCM2-218ENST00000541586 ZC3H12DA2A288 527 aaKnown RBP25.07■■□□□ 1.6
CCM2-218ENST00000541586 MLLT10P55197 1068 aa25.07■■□□□ 1.6
CCM2-218ENST00000541586 LTBQ06643 244 aa25.07■■□□□ 1.6
CCM2-218ENST00000541586 KLRB1Q12918 225 aa25.07■■□□□ 1.6
CCM2-218ENST00000541586 FOXF1Q12946 379 aa25.07■■□□□ 1.6
CCM2-218ENST00000541586 NFATC3Q12968 1075 aa25.07■■□□□ 1.6
CCM2-218ENST00000541586 PLPPR5Q32ZL2 321 aa25.07■■□□□ 1.6
CCM2-218ENST00000541586 FAM26EQ8N5C1 309 aa25.07■■□□□ 1.6
CCM2-218ENST00000541586 LIPHQ8WWY8 451 aa25.07■■□□□ 1.6
CCM2-218ENST00000541586 SH3D21A4FU49 640 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 A8MVM7 634 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 SURF4O15260 269 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 ENTPD6O75354 484 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 SNX4O95219 450 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 APOBEC1P41238 236 aaKnown RBP25.06■■□□□ 1.6
CCM2-218ENST00000541586 RPS5P46782 204 aaKnown RBP25.06■■□□□ 1.6
CCM2-218ENST00000541586 NR1H2P55055 460 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 FAM98AQ8NCA5 519 aaKnown RBP25.06■■□□□ 1.6
CCM2-218ENST00000541586 TMEM163Q8TC26 289 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 C1GALT1C1Q96EU7 318 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 IFT27Q9BW83 186 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms