RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 VASNQ6EMK4 673 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 C3orf33Q6P1S2 294 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 C1orf94Q6P1W5 598 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 FAM180AQ6UWF9 173 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 SLC46A3Q7Z3Q1 461 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 FGD2Q7Z6J4 655 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 GGNQ86UU5 652 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 HIPK1Q86Z02 1210 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 ZDHHC13Q8IUH4 622 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 RNF113BQ8IZP6 322 aaKnown RBP8.39□□□□□ -1.07
DDX55-208ENST00000541259 CBR4Q8N4T8 237 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 AQP11Q8NBQ7 271 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 PIGXQ8TBF5 258 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 FAR1Q8WVX9 515 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 GTPBP3Q969Y2 492 aaKnown RBP8.39□□□□□ -1.07
DDX55-208ENST00000541259 SLC25A36Q96CQ1 311 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 DDIT4LQ96D03 193 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 BPIFA2Q96DR5 249 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 SGTBQ96EQ0 304 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 DTNBP1Q96EV8 351 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 NRBF2Q96F24 287 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 WBP1Q96G27 269 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 ADGRG7Q96K78 797 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 OR5B2Q96R09 309 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 TIMP4Q99727 224 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 NIPSNAP1Q9BPW8 284 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 SLC19A3Q9BZV2 496 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 ASF1BQ9NVP2 202 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 SEC14L4Q9UDX3 406 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 AP4B1Q9Y6B7 739 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 ZFYVE26Q68DK2 2539 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 KMT2BQ9UMN6 2715 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 FREM1Q5H8C1 2179 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 PHF3Q92576 2039 aaKnown RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 SLC35F4A4IF30 521 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 FTCDNL1E5RQL4 147 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 NPIPA2E9PIF3 369 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 NPIPA3F8WFD2 350 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 EIF1AYO14602 144 aaKnown RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 EI24O14681 340 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 KLF4O43474 513 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 HCN1O60741 890 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 MITFO75030 526 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 OR7A10O76100 309 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 ACTL6AO96019 429 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 TP53P04637 393 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 IGFBP1P08833 259 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 ZNF26P17031 533 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 IDUAP35475 653 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 TDGF1P3P51864 188 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 MAP2K6P52564 334 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 ARHGDIAP52565 204 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 MLLT10P55197 1068 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 OR2B6P58173 313 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 NFATC3Q12968 1075 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 FHL1Q13642 323 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 GK3PQ14409 553 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 OR7A5Q15622 319 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 ZNF74Q16587 644 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 GXYLT1Q4G148 440 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 NHSL2Q5HYW2 709 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 FAHD1Q6P587 224 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 PLXDC2Q6UX71 529 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 ZBTB49Q6ZSB9 765 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 TMPRSS11FQ6ZWK6 438 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 CHERPQ8IWX8 916 aaKnown RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 GALNT4Q8N4A0 578 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 LINC00471Q8N535 108 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 C10orf53Q8N6V4 93 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 ATG16L2Q8NAA4 619 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 GNPDA2Q8TDQ7 276 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 SLC25A43Q8WUT9 341 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 EME1Q96AY2 570 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 WDYHV1Q96HA8 205 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 KLHL15Q96M94 604 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 GPR137Q96N19 417 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 PSD2Q9BQI7 771 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 C9orf16Q9BUW7 83 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 OSBPL10Q9BXB5 764 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 DGCR6LQ9BY27 220 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 SRXN1Q9BYN0 137 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 GABARAPL1Q9H0R8 117 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 TMEFF2Q9UIK5 374 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 MGAT4BQ9UQ53 548 aa8.38□□□□□ -1.07
DDX55-208ENST00000541259 SPIN1Q9Y657 262 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 RP1L1Q8IWN7 2480 aaPredicted RBP8.38□□□□□ -1.07
DDX55-208ENST00000541259 NBASA2RRP1 2371 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 TRAV27A0A087WT01 109 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 ARRDC5A6NEK1 342 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 UNC119BA6NIH7 251 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 LIPT2A6NK58 231 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 EFCAB9A8MZ26 197 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 ZNF814B7Z6K7 855 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 LINC01387J3KSC0 135 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 SULT2B1O00204 365 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 AQP7O14520 342 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 ATXN7O15265 892 aaPredicted RBP8.37□□□□□ -1.07
DDX55-208ENST00000541259 CXCL13O43927 109 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 PTP4A3O75365 173 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms