RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 NUFIP2Q7Z417 695 aaKnown RBP12.66□□□□□ -0.38
LTBR-209ENST00000541102 STK32CQ86UX6 486 aa12.66□□□□□ -0.38
LTBR-209ENST00000541102 CARM1Q86X55 608 aa12.66□□□□□ -0.38
LTBR-209ENST00000541102 RNF128Q8TEB7 428 aa12.66□□□□□ -0.38
LTBR-209ENST00000541102 C3orf49Q96BT1 292 aa12.66□□□□□ -0.38
LTBR-209ENST00000541102 ZNF775Q96BV0 537 aaPredicted RBP12.66□□□□□ -0.38
LTBR-209ENST00000541102 CCDC124Q96CT7 223 aaKnown RBP12.66□□□□□ -0.38
LTBR-209ENST00000541102 OR11A1Q9GZK7 315 aa12.66□□□□□ -0.38
LTBR-209ENST00000541102 ARMC7Q9H6L4 198 aa12.66□□□□□ -0.38
LTBR-209ENST00000541102 DCAF13Q9NV06 445 aaKnown RBP12.66□□□□□ -0.38
LTBR-209ENST00000541102 ZNF226Q9NYT6 803 aa12.66□□□□□ -0.38
LTBR-209ENST00000541102 V9GYQ6 96 aa12.66□□□□□ -0.38
LTBR-209ENST00000541102 PRRC2AP48634 2157 aaKnown RBP12.66□□□□□ -0.38
LTBR-209ENST00000541102 TMED7-TICAM2A0A0A6YYA0 188 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 ZC3H12DA2A288 527 aaKnown RBP12.65□□□□□ -0.38
LTBR-209ENST00000541102 CPSF4LA6NMK7 179 aaKnown RBP12.65□□□□□ -0.38
LTBR-209ENST00000541102 SULT2B1O00204 365 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 GSC2O15499 205 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 CCKARP32238 428 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 APOBEC1P41238 236 aaKnown RBP12.65□□□□□ -0.38
LTBR-209ENST00000541102 OR1Q1Q15612 314 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 ZSWIM7Q19AV6 140 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 WBP2NLQ6ICG8 309 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 CYP2R1Q6VVX0 501 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 BEND4Q6ZU67 534 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 C22orf34Q6ZV56 151 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 ATG4DQ86TL0 474 aaPredicted RBP12.65□□□□□ -0.38
LTBR-209ENST00000541102 P3H2Q8IVL5 708 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 BHLHE22Q8NFJ8 381 aaPredicted RBP12.65□□□□□ -0.38
LTBR-209ENST00000541102 OR52E4Q8NGH9 312 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 PROX1Q92786 737 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 NINJ1Q92982 152 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 SLC35B4Q969S0 331 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 PIK3IP1Q96FE7 263 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 HSH2DQ96JZ2 352 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 ARL5BQ96KC2 179 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 MCHR1Q99705 422 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 PLEKHF2Q9H8W4 249 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 GORASP2Q9H8Y8 452 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 FANCFQ9NPI8 374 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 SLC13A4Q9UKG4 626 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 PRPF19Q9UMS4 504 aaKnown RBP12.65□□□□□ -0.38
LTBR-209ENST00000541102 TMED7Q9Y3B3 224 aa12.65□□□□□ -0.38
LTBR-209ENST00000541102 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.38
LTBR-209ENST00000541102 A0A1W2PPR1 153 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 J3KTA2 159 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 ACOT8O14734 319 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 DNAJC8O75937 253 aaPredicted RBP12.64□□□□□ -0.39
LTBR-209ENST00000541102 GOSR1O95249 250 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 IFNA14P01570 189 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 YES1P07947 543 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 YAP1P46937 504 aaKnown RBP12.64□□□□□ -0.39
LTBR-209ENST00000541102 DIO1P49895 249 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 POLR2HP52434 150 aaKnown RBP12.64□□□□□ -0.39
LTBR-209ENST00000541102 CDH12P55289 794 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 RASGEF1BQ0VAM2 473 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 KEAP1Q14145 624 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 SPATS1Q496A3 300 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 SYT14P1Q58G82 188 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 ENTPD8Q5MY95 495 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 ALKBH2Q6NS38 261 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 PAMR1Q6UXH9 720 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 STAC2Q6ZMT1 411 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 WDR88Q6ZMY6 472 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 TMPPEQ6ZT21 453 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 SLC43A2Q8N370 569 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 LSMEM1Q8N8F7 131 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 AMBRA1Q9C0C7 1298 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 ADPRHL2Q9NX46 363 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 TESQ9UGI8 421 aaKnown RBP12.64□□□□□ -0.39
LTBR-209ENST00000541102 CHRNA9Q9UGM1 479 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 BAG5Q9UL15 447 aa12.64□□□□□ -0.39
LTBR-209ENST00000541102 HIVEP1P15822 2718 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 IGKV1D-42A0A075B6H8 117 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 A0A0B4J2E0 115 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 A0A1B0GX12 115 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 TCRBV5S2A0A599 114 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 DEFB108AA8MXU0 73 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 FFAR1O14842 300 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 SMAD9O15198 467 aaKnown RBP12.63□□□□□ -0.39
LTBR-209ENST00000541102 SIAH2O43255 324 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 RAF1P04049 648 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 CRYGSP22914 178 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 COPZ1P61923 177 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 CSNK2A1P68400 391 aaPredicted RBP12.63□□□□□ -0.39
LTBR-209ENST00000541102 EGR4Q05215 589 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 FOXD4Q12950 439 aaPredicted RBP12.63□□□□□ -0.39
LTBR-209ENST00000541102 PIN1Q13526 163 aaPredicted RBP12.63□□□□□ -0.39
LTBR-209ENST00000541102 TRIM25Q14258 630 aaKnown RBP12.63□□□□□ -0.39
LTBR-209ENST00000541102 SPNS3Q6ZMD2 512 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 DEF8Q6ZN54 512 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 WFDC8Q8IUA0 241 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 ARHGAP24Q8N264 748 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 SLC25A43Q8WUT9 341 aaPredicted RBP12.63□□□□□ -0.39
LTBR-209ENST00000541102 FOXC2Q99958 501 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 ACTR3BQ9P1U1 418 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 KLHL9Q9P2J3 617 aa12.63□□□□□ -0.39
LTBR-209ENST00000541102 MAGEL2Q9UJ55 1249 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms