RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TNFRSF10D	Q9UBN6	386 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KCNE3	Q9Y6H6	103 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	EP300	Q09472	2414 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		A0A1W2PRQ8	180 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF593	O00488	134 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TOR1A	O14656	332 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SPINT1	O43278	529 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PLAT	P00750	562 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C8orf89	P0DMQ9	161 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NUP62	P37198	522 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	LSS	P48449	732 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SMIM11A	P58511	58 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	UBE2I	P63279	158 aa	Known RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BTN3A2	P78410	334 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DSG2	Q14126	1118 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	LASP1	Q14847	261 aa	Known RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ISX	Q2M1V0	245 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CD276	Q5ZPR3	534 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAAP20	Q6NZ36	180 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C1orf94	Q6P1W5	598 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SFXN4	Q6P4A7	337 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PLBD1	Q6P4A8	553 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OAF	Q86UD1	273 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NKAIN4	Q8IVV8	208 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GPALPP1	Q8IXQ4	340 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CLEC1A	Q8NC01	280 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR5L2	Q8NGL0	311 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MOSPD2	Q8NHP6	518 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ADAMTS14	Q8WXS8	1223 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	THAP4	Q8WY91	577 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ELMOD3	Q96FG2	381 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	LIN37	Q96GY3	246 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SERINC2	Q96SA4	455 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SEC22C	Q9BRL7	303 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	A4GALT	Q9NPC4	353 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TEX10	Q9NXF1	929 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KCNMB2	Q9Y691	235 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CACNA1H	O95180	2353 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MEIKIN	A0A087WXM9	373 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		A0A1B0GX78	115 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		A0A1W2PS29	197 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PLPP1	O14494	284 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PIP5K1C	O60331	668 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GMDS	O60547	372 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RAD1	O60671	282 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ERAL1	O75616	437 aa	Known RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RGS9	O75916	674 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PTHLH	P12272	177 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NRG3	P56975	720 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RPS7	P62081	194 aa	Known RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SNTB2	Q13425	540 aa	Known RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OPCML	Q14982	345 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HBM	Q6B0K9	141 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ASCL5	Q7RTU5	278 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	LRRC28	Q86X40	367 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	VRK2	Q86Y07	508 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ADGRG3	Q86Y34	549 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SERPINA12	Q8IW75	414 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC22A18AS	Q8N1D0	253 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC25A45	Q8N413	288 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	UXS1	Q8NBZ7	420 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RSC1A1	Q92681	617 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C16orf58	Q96GQ5	468 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR2M2	Q96R28	347 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF649	Q9BS31	505 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NRSN2	Q9GZP1	204 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BRD7	Q9NPI1	651 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HINT3	Q9NQE9	182 aa	Known RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FSCN3	Q9NQT6	498 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NANS	Q9NR45	359 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SIRT3	Q9NTG7	399 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZCCHC3	Q9NUD5	404 aa	Known RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FBXL2	Q9UKC9	423 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NUBP2	Q9Y5Y2	271 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DOCK6	Q96HP0	2047 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TRPM6	Q9BX84	2022 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	hCG_1807616	A0A1W2PRN6	198 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		G3V3Q6	166 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CHRM4	P08173	479 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NAT2	P11245	290 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CSNK2A2	P19784	350 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	THBS2	P35442	1172 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	VEGFC	P49767	419 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GBX2	P52951	348 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RIN1	Q13671	783 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MELK	Q14680	651 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TMEM255A	Q5JRV8	349 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ATRAID	Q6UW56	229 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC29A4	Q7RTT9	530 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NRM	Q8IXM6	262 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C17orf47	Q8NEP4	570 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR2T4	Q8NH00	348 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR5P2	Q8WZ92	322 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	YIPF5	Q969M3	257 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TM4SF18	Q96CE8	201 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SAMD8	Q96LT4	415 aa		5.22	□□□□□ -1.57

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