RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 CPSF2Q9P2I0 782 aaKnown RBP6.91□□□□□ -1.3
KLHL42-203ENST00000540301 FZR1Q9UM11 496 aa6.91□□□□□ -1.3
KLHL42-203ENST00000540301 HDGFL3Q9Y3E1 203 aa6.91□□□□□ -1.3
KLHL42-203ENST00000540301 DTNAQ9Y4J8 743 aa6.91□□□□□ -1.3
KLHL42-203ENST00000540301 DOCK11Q5JSL3 2073 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 AGAP5A6NIR3 686 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 C17orf100A8MU93 164 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 H0YL77 283 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 C3orf84H3BNL1 204 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 EIF1BO60739 113 aaKnown RBP6.9□□□□□ -1.3
KLHL42-203ENST00000540301 ULK1O75385 1050 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 PLATP00750 562 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 HSD3B1P14060 373 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 CHN1P15882 459 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 HSD3B2P26439 372 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 IVDP26440 423 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 CRABP2P29373 138 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 GSTM5P46439 218 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 SLC35A1P78382 337 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 POU6F2P78424 691 aaPredicted RBP6.9□□□□□ -1.3
KLHL42-203ENST00000540301 ACSM2AQ08AH3 577 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 NKPD1Q17RQ9 610 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 PCGF3Q3KNV8 242 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 SPIN4Q56A73 249 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 DEFB121Q5J5C9 76 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 GKAP1Q5VSY0 366 aaPredicted RBP6.9□□□□□ -1.3
KLHL42-203ENST00000540301 FAM219BQ5XKK7 198 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 ACSM2BQ68CK6 577 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 TMEM154Q6P9G4 183 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 Q6YL49 198 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 USP51Q70EK9 711 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 ZNF551Q7Z340 670 aaPredicted RBP6.9□□□□□ -1.3
KLHL42-203ENST00000540301 TMEM86BQ8N661 226 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 PTGR2Q8N8N7 351 aaPredicted RBP6.9□□□□□ -1.3
KLHL42-203ENST00000540301 ZIC4Q8N9L1 334 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 FBXO36Q8NEA4 188 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 GRK7Q8WTQ7 553 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 CDKL2Q92772 493 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 PHF21AQ96BD5 680 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 C16orf58Q96GQ5 468 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 APIPQ96GX9 242 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 MS4A4EQ96PG1 132 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 OCSTAMPQ9BR26 566 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 BTBD2Q9BX70 525 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 OR11A1Q9GZK7 315 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 VPS11Q9H270 941 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 NOX4Q9NPH5 578 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 HINT3Q9NQE9 182 aaKnown RBP6.9□□□□□ -1.3
KLHL42-203ENST00000540301 SIRT3Q9NTG7 399 aaPredicted RBP6.9□□□□□ -1.3
KLHL42-203ENST00000540301 GRHL1Q9NZI5 618 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 TMEM181Q9P2C4 612 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 CHRNA9Q9UGM1 479 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 TRAPPC4Q9Y296 219 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 POLR3KQ9Y2Y1 108 aaPredicted RBP6.9□□□□□ -1.3
KLHL42-203ENST00000540301 CACNG2Q9Y698 323 aa6.9□□□□□ -1.3
KLHL42-203ENST00000540301 TENM2Q9NT68 2774 aa6.9□□□□□ -1.31
KLHL42-203ENST00000540301 COL7A1Q02388 2944 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 TRAV40A0A0B4J280 105 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CCDC189A1A4V9 331 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 ZNF503-AS2A6NEH8 195 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 TMEM229AB2RXF0 380 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 K7EIL1 84 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 TPD52L2O43399 206 aaKnown RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 DNAJA2O60884 412 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 UPK3AO75631 287 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CYP7B1O75881 506 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 ANXA4P09525 319 aaPredicted RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 PPIAL4GP0DN37 164 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 UBL4AP11441 157 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 BCKDHAP12694 445 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 ZNF35P13682 527 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 FUT4P22083 530 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 FKBP2P26885 142 aaKnown RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 APOBEC1P41238 236 aaKnown RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CAPZA2P47755 286 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 FNTAP49354 379 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CLK1P49759 484 aaKnown RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 ATP12AP54707 1039 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 SH3BGRP55822 239 aaPredicted RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 ARL4CP56559 192 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 RPS23P62266 143 aaKnown RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 PAX8Q06710 450 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CD69Q07108 199 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 FASTKD3Q14CZ7 662 aaKnown RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 FAM83EQ2M2I3 478 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 ATP6AP1LQ52LC2 224 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CDC73Q6P1J9 531 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 LETMD1Q6P1Q0 360 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 ZCCHC12Q6PEW1 402 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 LINGO2Q7L985 606 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 MDP1Q86V88 176 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CENPLQ8N0S6 344 aaPredicted RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 OR9K2Q8NGE7 335 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 OR10S1Q8NGN2 331 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 DYRK2Q92630 601 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 PHF21BQ96EK2 531 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CHMP6Q96FZ7 201 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 BAG1Q99933 345 aaPredicted RBP6.89□□□□□ -1.31
KLHL42-203ENST00000540301 CCDC106Q9BWC9 280 aa6.89□□□□□ -1.31
KLHL42-203ENST00000540301 LAT2Q9GZY6 243 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms