RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 GAL3ST4Q96RP7 486 aa12.52□□□□□ -0.4
BNIP3-202ENST00000540159 CNN2Q99439 309 aaKnown RBP12.52□□□□□ -0.4
BNIP3-202ENST00000540159 NTMQ9P121 344 aa12.52□□□□□ -0.4
BNIP3-202ENST00000540159 TMEM184BQ9Y519 407 aaPredicted RBP12.52□□□□□ -0.4
BNIP3-202ENST00000540159 DCTN6O00399 190 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 GMDSO60547 372 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 SDC3O75056 442 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 SLC43A1O75387 559 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 IFNGP01579 166 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 NPR2P20594 1047 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 SLC2A5P22732 501 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 SIRPAP78324 504 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 ACSM1Q08AH1 577 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 PON3Q15166 354 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 DMKNQ6E0U4 476 aaPredicted RBP12.52□□□□□ -0.41
BNIP3-202ENST00000540159 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 RNF113BQ8IZP6 322 aaKnown RBP12.52□□□□□ -0.41
BNIP3-202ENST00000540159 YIPF5Q969M3 257 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 SCARF2Q96GP6 870 aaPredicted RBP12.52□□□□□ -0.41
BNIP3-202ENST00000540159 AHCYL2Q96HN2 611 aaKnown RBP12.52□□□□□ -0.41
BNIP3-202ENST00000540159 OR10A4Q9H209 315 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 KCNK15Q9H427 330 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 PNO1Q9NRX1 252 aaKnown RBP12.52□□□□□ -0.41
BNIP3-202ENST00000540159 SOHLH2Q9NX45 425 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 WBP1LQ9NX94 342 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 ST6GALNAC2Q9UJ37 374 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 IKZF2Q9UKS7 526 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 RCE1Q9Y256 329 aa12.52□□□□□ -0.41
BNIP3-202ENST00000540159 A0A0J9YY10 115 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 APBB3O95704 486 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 EPXP11678 715 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 HPGDP15428 266 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 PLA1AQ53H76 456 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 GIMAP1Q8WWP7 306 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 ELSPBP1Q96BH3 223 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 GABRG3Q99928 467 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 SPRTNQ9H040 489 aaPredicted RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 C11orf98E9PRG8 122 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 SMAD9O15198 467 aaKnown RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 NDUFB2O95178 105 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 WISP1O95388 367 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 SEMA4FO95754 770 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 C1QBP02746 253 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 MAS1P04201 325 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 THEGLP0DJG4 465 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 GBX2P52951 348 aaPredicted RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 CD226Q15762 336 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 NKAIN2Q5VXU1 208 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 GPALPP1Q8IXQ4 340 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 CMTM4Q8IZR5 234 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 TCTE3Q8IZS6 198 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 OR8H3Q8N146 312 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 ZNF431Q8TF32 576 aaPredicted RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 SGTBQ96EQ0 304 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 OR8D2Q9GZM6 311 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 MKKSQ9NPJ1 570 aaPredicted RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 URB1O60287 2271 aaKnown RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 NUDT14O95848 222 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 DHFRP00374 187 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 HPXP02790 462 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 GABRG2P18507 467 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 OR1D4P47884 311 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 KIAA1024LP59773 190 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 PLA2G7Q13093 441 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 SNTB2Q13425 540 aaKnown RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 CDK5R1Q15078 307 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 HSD17B12Q53GQ0 312 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 METAP1DQ6UB28 335 aaPredicted RBP12.51□□□□□ -0.41
BNIP3-202ENST00000540159 OR10AC1Q8NH08 325 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 OR51Q1Q8NH59 317 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 SLA2Q9H6Q3 261 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 KLHDC2Q9Y2U9 406 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 SLC6A5Q9Y345 797 aa12.51□□□□□ -0.41
BNIP3-202ENST00000540159 GATBO75879 557 aaKnown RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 TRAPPC2P0DI81 140 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 TRAPPC2BP0DI82 140 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 S1PR1P21453 382 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 RBMS1P29558 406 aaKnown RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 AKT2P31751 481 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 CDKN2AP42771 156 aaKnown RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 TNFRSF4P43489 277 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 GFERP55789 205 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 NRG3P56975 720 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 FGFBP1Q14512 234 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 ARHGAP11AQ6P4F7 1023 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 ZNF613Q6PF04 617 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 LRRC69Q6ZNQ3 347 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 MCATQ8IVS2 390 aaKnown RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 ZNF527Q8NB42 609 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 GALNT6Q8NCL4 622 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 ACOT12Q8WYK0 555 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 CREB3L1Q96BA8 519 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 WDR89Q96FK6 387 aaPredicted RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 TOE1Q96GM8 510 aaKnown RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 STACQ99469 402 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 DPAGT1Q9H3H5 408 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms