RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 SNAP47Q5SQN1 464 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 LMX1AQ8TE12 382 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.54□□□□□ -0.72
C11orf54-214ENST00000540113 PMM1Q92871 262 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 GCDHQ92947 438 aaPredicted RBP10.54□□□□□ -0.72
C11orf54-214ENST00000540113 TRIM63Q969Q1 353 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 RFT1Q96AA3 541 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 ZC3HAV1LQ96H79 300 aaKnown RBP10.54□□□□□ -0.72
C11orf54-214ENST00000540113 HSPA12BQ96MM6 686 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 CNN2Q99439 309 aaKnown RBP10.54□□□□□ -0.72
C11orf54-214ENST00000540113 ABCG5Q9H222 651 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 LMAN1LQ9HAT1 526 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 BRD7Q9NPI1 651 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 INPP5EQ9NRR6 644 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 PNO1Q9NRX1 252 aaKnown RBP10.54□□□□□ -0.72
C11orf54-214ENST00000540113 SOHLH2Q9NX45 425 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 SERTAD3Q9UJW9 196 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 FBXL21Q9UKT6 434 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 NOX1Q9Y5S8 564 aa10.54□□□□□ -0.72
C11orf54-214ENST00000540113 ALPK2Q86TB3 2170 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 IGHV5-51A0A0C4DH38 117 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 TRBV2A0A0J9YWF9 115 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 TEX13CA0A0J9YWL9 993 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 CDC14CA4D256 554 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 FAM172BPA6NC97 362 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 ANKRD61A6NGH8 418 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 AKR7A2O43488 359 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 SDC3O75056 442 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 CPNE3O75131 537 aaKnown RBP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 F13BP05160 661 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 HLA-DMAP28067 261 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 NUDT1P36639 197 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 AQP2P41181 271 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 RBM34P42696 430 aaKnown RBP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 RPS11P62280 158 aaKnown RBP eCLIP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 DGCR2P98153 550 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 RIN1Q13671 783 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 POMZP3Q6PJE2 187 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 MED25Q71SY5 747 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 ZNF550Q7Z398 422 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 ZNF511Q8NB15 262 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 NPEPL1Q8NDH3 523 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 OR51Q1Q8NH59 317 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 HSD17B8Q92506 261 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 C3orf49Q96BT1 292 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 Q96M85 177 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 ZNF285Q96NJ3 590 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 MOGAT1Q96PD6 335 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 MRPL15Q9P015 296 aaKnown RBP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 ITGB1BP2Q9UKP3 347 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 CA14Q9ULX7 337 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 IGKV1D-42A0A075B6H8 117 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 A0A087WUJ7 227 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 ACOD1A6NK06 481 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 SRPX2O60687 465 aaPredicted RBP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 PRAMEF2O60811 474 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 RPP14O95059 124 aaKnown RBP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 CLPSP04118 112 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 SYPP08247 313 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 ADRB1P08588 477 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 TRAPPC2P0DI81 140 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 TRAPPC2BP0DI82 140 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 SPI1P17947 270 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 NPR2P20594 1047 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 BTCP35070 178 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 RPS27P42677 84 aaKnown RBP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 CDKN2AP42771 156 aaKnown RBP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 OR1D4P47884 311 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 SIRPAP78324 504 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 CDK5R1Q15078 307 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 BCL2L15Q5TBC7 163 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 APOOLQ6UXV4 268 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 PHOSPHO1Q8TCT1 267 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 TCTN2Q96GX1 697 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 DERL3Q96Q80 235 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 MARVELD1Q9BSK0 173 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 NRSN2Q9GZP1 204 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 RPRD1BQ9NQG5 326 aaKnown RBP10.53□□□□□ -0.72
C11orf54-214ENST00000540113 HAO2Q9NYQ3 351 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 BAIAP2Q9UQB8 552 aa10.53□□□□□ -0.72
C11orf54-214ENST00000540113 SOX1O00570 391 aaPredicted RBP10.52□□□□□ -0.73
C11orf54-214ENST00000540113 CLDN4O14493 209 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 WISP1O95388 367 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 NSA2O95478 260 aaKnown RBP10.52□□□□□ -0.73
C11orf54-214ENST00000540113 GPANK1O95872 356 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 YES1P07947 543 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 GUSBP08236 651 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 AHCYP23526 432 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 CD27P26842 260 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 CD38P28907 300 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 FNTBP49356 437 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 GBX2P52951 348 aaPredicted RBP10.52□□□□□ -0.73
C11orf54-214ENST00000540113 TAS2R43P59537 309 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 ACTC1P68032 377 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 ACTA1P68133 377 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 PON3Q15166 354 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 SMAD2Q15796 467 aaKnown RBP10.52□□□□□ -0.73
C11orf54-214ENST00000540113 DEFB133Q30KQ1 61 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 CEP78Q5JTW2 689 aa10.52□□□□□ -0.73
C11orf54-214ENST00000540113 HES5Q5TA89 166 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms