RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 CNR1P21554 472 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 LSSP48449 732 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 DHPSP49366 369 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-214ENST00000540109 FOXA1P55317 472 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 UBE2KP61086 200 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 CDK6Q00534 326 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 FOXO1Q12778 655 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 TNK1Q13470 666 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 TMEM52BQ4KMG9 183 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 DNLZQ5SXM8 178 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 FRG2Q64ET8 278 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF585AQ6P3V2 769 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 NIPAL3Q6P499 406 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 Q6ZSR9 355 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 SYT13Q7L8C5 426 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 WDR20Q8TBZ3 569 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 GLYATL1Q969I3 302 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 FRG2BQ96QU4 278 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 SLC25A31Q9H0C2 315 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 APMAPQ9HDC9 416 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 TNFRSF12AQ9NP84 129 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 MAN2C1Q9NTJ4 1040 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 SHPKQ9UHJ6 478 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 GOLT1BQ9Y3E0 138 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 H0YIV9 168 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 K7ERQ8 282 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 ARHGAP33O14559 1287 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 NDUFS6O75380 124 aaKnown RBP5.64□□□□□ -1.51
PTPRD-214ENST00000540109 FBXO24O75426 580 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 CDKN1CP49918 316 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-214ENST00000540109 SCARB2Q14108 478 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 RNASE10Q5GAN6 216 aaKnown RBP5.64□□□□□ -1.51
PTPRD-214ENST00000540109 SPANXN4Q5MJ08 99 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 OR4F3Q6IEY1 312 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 JAZF1Q86VZ6 243 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-214ENST00000540109 LMNTD1Q8N9Z9 388 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 ZCCHC10Q8TBK6 192 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 SPPL3Q8TCT6 385 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 XAGE5Q8WWM1 108 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 C16orf58Q96GQ5 468 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 ST6GAL2Q96JF0 529 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 SLC22A7Q9Y694 548 aa5.64□□□□□ -1.51
PTPRD-214ENST00000540109 NUP210Q8TEM1 1887 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-214ENST00000540109 A0A1W2PS29 197 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 ANKRD28O15084 1053 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 TAPBPO15533 448 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 OR8U9P0C7N5 309 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 TMIGD3P0DMS9 266 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-214ENST00000540109 SPP1P10451 314 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 RPL29P47914 159 aaKnown RBP5.63□□□□□ -1.51
PTPRD-214ENST00000540109 MASP1P48740 699 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 AGTR2P50052 363 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 UBE2MP61081 183 aaKnown RBP5.63□□□□□ -1.51
PTPRD-214ENST00000540109 ELAVL3Q14576 367 aaKnown RBP5.63□□□□□ -1.51
PTPRD-214ENST00000540109 GTDC1Q4AE62 458 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 OR52W1Q6IF63 320 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 MED27Q6P2C8 311 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF584Q8IVC4 421 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 EXTL1Q92935 676 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 TMEM18Q96B42 140 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 WDR34Q96EX3 536 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 THOC3Q96J01 351 aaKnown RBP5.63□□□□□ -1.51
PTPRD-214ENST00000540109 GHRLQ9UBU3 117 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 CACFD1Q9UGQ2 172 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 PSORS1C1Q9UIG5 152 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 BTNL2Q9UIR0 455 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 LAMP5Q9UJQ1 280 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 PCDHB10Q9UN67 800 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 CROCCQ5TZA2 2017 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 HYKKA2RU49 373 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 OR6C6A6NF89 314 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 OR2AG2A6NM03 316 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 HMSDA8MTL9 139 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 GPR137BO60478 399 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 SYPP08247 313 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 PRSS56P0CW18 603 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 RRASP10301 218 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 ACVR1BP36896 505 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 HOXC5Q00444 222 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 HEPHL1Q6MZM0 1159 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 WDR74Q6RFH5 385 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-214ENST00000540109 MBOAT1Q6ZNC8 495 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 MOB1BQ7L9L4 216 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 TECPR1Q7Z6L1 1165 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 OR6T1Q8NGN1 323 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 CCDC3Q9BQI4 270 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 URM1Q9BTM9 101 aaKnown RBP5.63□□□□□ -1.51
PTPRD-214ENST00000540109 SMIM3Q9BZL3 60 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 VNN3Q9NY84 501 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 ENPP4Q9Y6X5 453 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 NPIPA5A0A0B4J1W7 369 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 TMEM129A0AVI4 362 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 OR5K3A6NET4 321 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 TRABD2BA6NFA1 517 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF587BE7ETH6 402 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 PEX12O00623 359 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 MT-CO2P00403 227 aa5.63□□□□□ -1.51
PTPRD-214ENST00000540109 TCRBP04435 133 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms