RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SELPLGQ14242 412 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 RNPS1Q15287 305 aaKnown RBP13.22□□□□□ -0.29
USB1-203ENST00000539737 TMEM201Q5SNT2 666 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 ZNF836Q6ZNA1 936 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 DNM1P46Q6ZS02 220 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 NET1Q7Z628 596 aaPredicted RBP13.22□□□□□ -0.29
USB1-203ENST00000539737 ARPINQ7Z6K5 226 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 C10orf111Q8N326 155 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 POU5F2Q8N7G0 328 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 FBXO27Q8NI29 283 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 ZNF563Q8TA94 476 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 FBXW5Q969U6 566 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 ZNF524Q96C55 264 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 RCN3Q96D15 328 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 CMTM5Q96DZ9 223 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 ZNF607Q96SK3 696 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 MYLK2Q9H1R3 596 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 SERINC1Q9NRX5 453 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 PRDM4Q9UKN5 801 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 A0A096LNT2 108 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 PRORSD1PA6NEY8 169 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 CFAP73A6NFT4 308 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 A8MV72 311 aaPredicted RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 FAAHO00519 579 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 BCAS1O75363 584 aaPredicted RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 DCTN3O75935 186 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 CD3EP07766 207 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 PRDX6P30041 224 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 PRKAR1BP31321 381 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 PLAURQ03405 335 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 SPOCK1Q08629 439 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 TOMM34Q15785 309 aaPredicted RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 ADRM1Q16186 407 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 CHRFAM7AQ494W8 412 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 ZNF672Q499Z4 452 aaPredicted RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 ZNF311Q5JNZ3 666 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 C6orf52Q5T4I8 152 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 NANOGP8Q6NSW7 305 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 C3orf33Q6P1S2 294 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 TFAP2EQ6VUC0 442 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 PIGWQ7Z7B1 504 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 VRK2Q86Y07 508 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 PTOV1Q86YD1 416 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 TUSC5Q8IXB3 177 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 ATP6V1C2Q8NEY4 427 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 BHLHE22Q8NFJ8 381 aaPredicted RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 TMEM158Q8WZ71 300 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 SLC35B4Q969S0 331 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 ZNF775Q96BV0 537 aaPredicted RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 TACO1Q9BSH4 297 aaKnown RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 NANOGQ9H9S0 305 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 ACER3Q9NUN7 267 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 PRSS50Q9UI38 385 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 AP3M1Q9Y2T2 418 aa13.21□□□□□ -0.29
USB1-203ENST00000539737 SPIN1Q9Y657 262 aaPredicted RBP13.21□□□□□ -0.29
USB1-203ENST00000539737 MALRD1Q5VYJ5 2156 aa13.21□□□□□ -0.3
USB1-203ENST00000539737 EFNA2O43921 213 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 SHOX2O60902 331 aaPredicted RBP13.2□□□□□ -0.3
USB1-203ENST00000539737 SERPINB7O75635 380 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 ADAP00813 363 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
USB1-203ENST00000539737 RYKP34925 604 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 PCGF2P35227 344 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 HTR3AP46098 478 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 SESN3P58005 492 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 MERTKQ12866 999 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 EPS8Q12929 822 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 TMEM176BQ3YBM2 270 aaPredicted RBP13.2□□□□□ -0.3
USB1-203ENST00000539737 INTS11Q5TA45 600 aaKnown RBP13.2□□□□□ -0.3
USB1-203ENST00000539737 GKAP1Q5VSY0 366 aaPredicted RBP13.2□□□□□ -0.3
USB1-203ENST00000539737 DHRS4L2Q6PKH6 230 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 GRINAQ7Z429 371 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 TREML1Q86YW5 311 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 GABRG1Q8N1C3 465 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 SLC43A2Q8N370 569 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 OR10A6Q8NH74 314 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 SLC25A43Q8WUT9 341 aaPredicted RBP13.2□□□□□ -0.3
USB1-203ENST00000539737 ECSITQ9BQ95 431 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 TRAF4Q9BUZ4 470 aaPredicted RBP13.2□□□□□ -0.3
USB1-203ENST00000539737 EFCAB1Q9HAE3 211 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 GPR52Q9Y2T5 361 aa13.2□□□□□ -0.3
USB1-203ENST00000539737 ZNF814B7Z6K7 855 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 TLX2O43763 284 aaPredicted RBP13.19□□□□□ -0.3
USB1-203ENST00000539737 LYZL6O75951 148 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 LY6HO94772 140 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 FAM107AO95990 144 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 ZNF16P17020 682 aaPredicted RBP13.19□□□□□ -0.3
USB1-203ENST00000539737 IL32P24001 234 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 APOBEC1P41238 236 aaKnown RBP13.19□□□□□ -0.3
USB1-203ENST00000539737 COPZ1P61923 177 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 STK11Q15831 433 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 ZNF239Q16600 458 aaKnown RBP13.19□□□□□ -0.3
USB1-203ENST00000539737 RABL3Q5HYI8 236 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 ERICH5Q6P6B1 374 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 HACD2Q6Y1H2 254 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
USB1-203ENST00000539737 ANKS4BQ8N8V4 417 aa13.19□□□□□ -0.3
USB1-203ENST00000539737 STEAP2Q8NFT2 490 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms