RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CLDN16Q9Y5I7 305 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 RP1P56715 2156 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 TVP23AA6NH52 213 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 SLC35E2P0CK97 266 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 EPXP11678 715 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 AKT2P31751 481 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 SOX2P48431 317 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 ATP12AP54707 1039 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 PLA2G7Q13093 441 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 RIN1Q13671 783 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 THOC7Q6I9Y2 204 aaKnown RBP12.88□□□□□ -0.35
UBE3B-210ENST00000539599 NRSN2Q9GZP1 204 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 SLCO1C1Q9NYB5 712 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 TMEM5Q9Y2B1 443 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 ENTPD2Q9Y5L3 495 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 CELSR3Q9NYQ7 3312 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 LRP4O75096 1905 aa12.88□□□□□ -0.35
UBE3B-210ENST00000539599 OR5K3A6NET4 321 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 MEN1O00255 615 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 TNFP01375 233 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 THEGLP0DJG4 465 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 NRG3P56975 720 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 APOOLQ6UXV4 268 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 MCATQ8IVS2 390 aaKnown RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 BCORP1Q8N888 145 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 NPEPL1Q8NDH3 523 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 OR8K3Q8NH51 312 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 ZNF671Q8TAW3 534 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 ACOT12Q8WYK0 555 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 CNN2Q99439 309 aaKnown RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 RTN4RQ9BZR6 473 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 IRF2BPLQ9H1B7 796 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 S1PR5Q9H228 398 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 ING3Q9NXR8 418 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 PCNX3Q9H6A9 2034 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 TOXO94900 526 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 OR8G3PP0DMU2 310 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 CTSEP14091 401 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 SPI1P17947 270 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 RBMS1P29558 406 aaKnown RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 CDKN2AP42771 156 aaKnown RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 GFERP55789 205 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 SIRPAP78324 504 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 FZD2Q14332 565 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 TMEM151BQ8IW70 566 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 GPALPP1Q8IXQ4 340 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 TOMM5Q8N4H5 51 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 GPBAR1Q8TDU6 330 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 RGP1Q92546 391 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 MMABQ96EY8 250 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 TOE1Q96GM8 510 aaKnown RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 UBL7Q96S82 380 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 SRA1Q9HD15 236 aaKnown RBP12.87□□□□□ -0.35
UBE3B-210ENST00000539599 NCDNQ9UBB6 729 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 KLHL21Q9UJP4 597 aa12.87□□□□□ -0.35
UBE3B-210ENST00000539599 IGKV1D-42A0A075B6H8 117 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 GMDSO60547 372 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 RAD1O60671 282 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 FMO6PO60774 539 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 NDUFB2O95178 105 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 C1QBP02746 253 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 SSTR2P30874 369 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 HTR4Q13639 388 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ZNHIT3Q15649 155 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ARHGAP11AQ6P4F7 1023 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 LEG1Q6P5S2 330 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 PRSS58Q8IYP2 241 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 SMIM19Q96E16 107 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 SGTBQ96EQ0 304 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 UCKL1Q9NWZ5 548 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 FLRT2O43155 660 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 TCRBP04435 133 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 POU3F3P20264 500 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 CFL1P23528 166 aaKnown RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 MRPL28Q13084 256 aaKnown RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 MAB21L1Q13394 359 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 NKAIN2Q5VXU1 208 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 CMTM4Q8IZR5 234 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ARHGEF39Q8N4T4 335 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 C19orf47Q8N9M1 422 aaKnown RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ZDHHC1Q8WTX9 485 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 C3orf49Q96BT1 292 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 LMAN2LQ9H0V9 348 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 MED28Q9H204 178 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 SLA2Q9H6Q3 261 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 TMEM72A0PK05 275 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 IFNGP01579 166 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 TMIGD3P0DMS9 266 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ERP29P30040 261 aaKnown RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 FGFBP1Q14512 234 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ZSWIM7Q19AV6 140 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ULK3Q6PHR2 472 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 LINGO2Q7L985 606 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 OOSP2Q86WS3 158 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ZNF655Q8N720 491 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-210ENST00000539599 OR10AC1Q8NH08 325 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 FAM174AQ8TBP5 190 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms