RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 LRRTM2O43300 516 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 UTS2O95399 124 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 UBL4AP11441 157 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 IFNGR2P38484 337 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 GPR4P46093 362 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 OR2G6Q5TZ20 316 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 ACSM5Q6NUN0 579 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 C16orf47Q6ZP98 133 aaPredicted RBP15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 WDR77Q9BQA1 342 aaPredicted RBP15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 PLA2G12AQ9BZM1 189 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 EGLN3Q9H6Z9 239 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 TMEM27Q9HBJ8 222 aa15.62■□□□□ 0.09
PCDHB17P-201ENST00000539533 APOL3O95236 402 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 HPGDP15428 266 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 GIPRP48546 466 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 GAS1P54826 345 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 EFR3AQ14156 821 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 CD226Q15762 336 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 CRTC2Q53ET0 693 aaPredicted RBP15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 KLHL22Q53GT1 634 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 PAPD4Q6PIY7 484 aaKnown RBP15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 TCTE3Q8IZS6 198 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF441Q8N8Z8 693 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZFAND1Q8TCF1 268 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 FGF11Q92914 225 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 MR1Q95460 341 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 TM9SF2Q99805 663 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 SF3B6Q9Y3B4 125 aaKnown RBP15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 B3GALT1Q9Y5Z6 326 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 A0A1B0GWA3 101 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 PMS2P1A4D2B8 440 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 SLC30A4O14863 429 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 ARHGEF9O43307 516 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 ICOSLGO75144 302 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 KLK3P07288 261 aaPredicted RBP15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 RNF4P78317 190 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 FAPQ12884 760 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 TSPAN31Q12999 210 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 TPBGQ13641 420 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 PLET1Q6UQ28 207 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 CMIPQ8IY22 773 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 TOR1AIP2Q8NFQ8 470 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 GATAD2BQ8WXI9 593 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 TMEM9BQ9NQ34 198 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 SPEF1Q9Y4P9 236 aa15.61■□□□□ 0.09
PCDHB17P-201ENST00000539533 HEATR5AQ86XA9 2040 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 A0A0B4J2E0 115 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 A0A1B0GX12 115 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 SYNDIG1LA6NDD5 238 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 OR6C76A6NM76 312 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 GSTM3P21266 225 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 APEX1P27695 318 aaKnown RBP15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 ABCD3P28288 659 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 ERP29P30040 261 aaKnown RBP15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 MAP2K3P46734 347 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 CAV3P56539 151 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 EFNB1P98172 346 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 INSM1Q01101 510 aaPredicted RBP15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 SNAPC1Q16533 368 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 TATDN3Q17R31 274 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF613Q6PF04 617 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 PAMR1Q6UXH9 720 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF550Q7Z398 422 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 CPEB2Q7Z5Q1 589 aaKnown RBP15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 PFN4Q8NHR9 129 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 PHOSPHO1Q8TCT1 267 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 THAP3Q8WTV1 239 aaPredicted RBP15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 TMEM239Q8WW34 195 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 RTN4RQ9BZR6 473 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 SEMA4CQ9C0C4 833 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 C20orf141Q9NUB4 165 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 KLHL21Q9UJP4 597 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 MRTO4Q9UKD2 239 aaKnown RBP15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 TMEM129A0AVI4 362 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 C4orf47A7E2U8 309 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 SCDO00767 359 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 CDC42EP2O14613 210 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 TO15178 435 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 OIP5O43482 229 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 HCN1O60741 890 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 SLC2A2P11168 524 aaPredicted RBP15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 IL12BP29460 328 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 PPP3R1P63098 170 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 CDK5Q00535 292 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 PLCXD2Q0VAA5 305 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 FNDC7Q5VTL7 733 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 TRIQKQ629K1 86 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 TMEM205Q6UW68 189 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 YIPF7Q8N8F6 280 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 ZNF527Q8NB42 609 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 POGLUT1Q8NBL1 392 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 NLGN4YQ8NFZ3 816 aaPredicted RBP15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 UFD1Q92890 307 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 OMA1Q96E52 524 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 RNFT2Q96EX2 444 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 TRIM2Q9C040 744 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 EVA1AQ9H8M9 152 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 ATP13A2Q9NQ11 1180 aa15.6■□□□□ 0.09
PCDHB17P-201ENST00000539533 COMMD3Q9UBI1 195 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms