RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 DMRTA2Q96SC8 542 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 TCEAL2Q9H3H9 227 aaPredicted RBP11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 EMC7Q9NPA0 242 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 PHF11Q9UIL8 331 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 FBXL2Q9UKC9 423 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 COPS3Q9UNS2 423 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 FANCMQ8IYD8 2048 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 A0A0G2JK05 382 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 G3V3Q6 166 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ARPC5O15511 151 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 CELA2BP08218 269 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 NID1P14543 1247 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 GLULP15104 373 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 DLX2Q07687 328 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 CRMP1Q14194 572 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 KCNAB1Q14722 419 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 KIR2DS3Q14952 304 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ALG11Q2TAA5 492 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 PRICKLE4Q2TBC4 344 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 GARNL3Q5VVW2 1013 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF619Q8N2I2 560 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 FANK1Q8TC84 345 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ST8SIA4Q92187 359 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 OR1F2PQ96R84 312 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 GSX2Q9BZM3 304 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF436Q9C0F3 470 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 C20orf85Q9H1P6 137 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ERVMER34-1Q9H9K5 563 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 MAB21L2Q9Y586 359 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 TRAPPC13A5PLN9 417 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 PPP1R3DO95685 299 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 THBS1P07996 1170 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 PRKACAP17612 351 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 MAP3K8P41279 467 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 RPS15P62841 145 aaKnown RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 SHC2P98077 582 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF613Q6PF04 617 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ATRAIDQ6UW56 229 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 APOOLQ6UXV4 268 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 C17orf107Q6ZR85 190 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF761Q86XN6 746 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 OR52I2Q8NH67 350 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 MRGPRX1Q96LB2 322 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 WDR92Q96MX6 357 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 JAM3Q9BX67 310 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 TRIM36Q9NQ86 728 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 FBXO9Q9UK97 447 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 NUBP2Q9Y5Y2 271 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 C7orf66A4D0T2 115 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 OR5K3A6NET4 321 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 STX11O75558 287 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 ATP1B1P05026 303 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 NGFRP08138 427 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 HOXD4P09016 255 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 NDUFS1P28331 727 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 MTNR1BP49286 362 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 FNTBP49356 437 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 HYAL1Q12794 435 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 FHL1Q13642 323 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 COL28A1Q2UY09 1125 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 MEPCEQ7L2J0 689 aaKnown RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 RELL2Q8NC24 303 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 OR8K3Q8NH51 312 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 HS6ST2Q96MM7 605 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 TEAD3Q99594 435 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 SDHAF2Q9NX18 166 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 CEP290O15078 2479 aa11.55□□□□□ -0.56
SFSWAP-208ENST00000539506 A0A1B0GVT2 93 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 C4orf47A7E2U8 309 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 KHDRBS3O75525 346 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 HOXC4P09017 264 aaPredicted RBP11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 RRASP10301 218 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 BMP7P18075 431 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 NT5EP21589 574 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 FOXK2Q01167 660 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 SHHQ15465 462 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF542PQ5EBM4 170 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 PYHIN1Q6K0P9 492 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 TMEM92Q6UXU6 159 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 CMTM4Q8IZR5 234 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 LNX2Q8N448 690 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 DNAAF1Q8NEP3 725 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 OR4N2Q8NGD1 307 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 SLC22A18Q96BI1 424 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 NDC1Q9BTX1 674 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 POT1Q9NUX5 634 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 ASB6Q9NWX5 421 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 FLRT3Q9NZU0 649 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 RPS6KB2Q9UBS0 482 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 SIGLEC7Q9Y286 467 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 FXYD6-FXYD2A0A087WZ82 144 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 L7N2F9 121 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 AGR2O95994 175 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 HMGN1P05114 100 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 LPLP06858 475 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 RBMS1P29558 406 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 DCTDP32321 178 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 GABRA3P34903 492 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 FCRLAQ7L513 359 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms