RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MCUR1Q96AQ8 359 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 TUBGCP3Q96CW5 907 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 PELI1Q96FA3 418 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF274Q96GC6 653 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 AKR1E2Q96JD6 320 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 C9orf72Q96LT7 481 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ACBD6Q9BR61 282 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ANKRD60Q9BZ19 345 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ELOVL4Q9GZR5 314 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 DNTTIP1Q9H147 329 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 KAT8Q9H7Z6 458 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 WDR41Q9HAD4 459 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 TEX10Q9NXF1 929 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 EFCAB6Q5THR3 1501 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SCN2AQ99250 2005 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 NRXN3Q9Y4C0 1643 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 FRMPD1Q5SYB0 1578 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 UNC79Q9P2D8 2635 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CEP170BQ9Y4F5 1589 aaPredicted RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CEP350Q5VT06 3117 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ARHGEF33A8MVX0 844 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 H7C423 109 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 HIP1O00291 1037 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SAP18O00422 153 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 KIAA0754O94854 1291 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SNAPINO95295 136 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 F10P00742 488 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 IL1BP01584 269 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 THY1P04216 161 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 PCCBP05166 539 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 RPLP0P05388 317 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 UCP1P25874 307 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ATP5C1P36542 298 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 PTGDSP41222 190 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SLC1A4P43007 532 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 OR1D4P47884 311 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ARHGDIBP52566 201 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 MRPS11P82912 194 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 FKBP3Q00688 224 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 SELPLGQ14242 412 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 KCNJ11Q14654 390 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 USF2Q15853 346 aaPredicted RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 BCL7AQ4VC05 210 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 OR2B11Q5JQS5 317 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 PDZK1Q5T2W1 519 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 LCE3CQ5T5A8 94 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 C9orf66Q5T8R8 295 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 PRAMEF20Q5VT98 475 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 LIPNQ5VXI9 398 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 OTPQ5XKR4 325 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF57Q68EA5 555 aaPredicted RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 APOBEC3HQ6NTF7 200 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 UTS2BQ765I0 119 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 PRSS41Q7RTY9 318 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF329Q86UD4 541 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 BPIFB2Q8N4F0 458 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 C3orf22Q8N5N4 141 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CSGALNACT2Q8N6G5 542 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF525Q8N782 197 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 Q8N9G6 341 aaPredicted RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 MDS2Q8NDY4 140 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 LHX4Q969G2 390 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 UPRTQ96BW1 309 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ECHDC3Q96DC8 303 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 JSRP1Q96MG2 331 aaPredicted RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 TNFRSF13CQ96RJ3 184 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CCT8L2Q96SF2 557 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF184Q99676 751 aaPredicted RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 LLPHQ9BRT6 129 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF416Q9BWM5 594 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 TM2D1Q9BX74 207 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 GLIPR2Q9H4G4 154 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ALG9Q9H6U8 611 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 GDF3Q9NR23 364 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 FAM114A2Q9NRY5 505 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 DEPPQ9NTK1 212 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ELOVL2Q9NXB9 296 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 TAS2R16Q9NYV7 291 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ARMCX1Q9P291 453 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ANAPC7Q9UJX3 599 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 RAB26Q9ULW5 256 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 EXOGQ9Y2C4 368 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CSNK1G3Q9Y6M4 447 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 KDM5BQ9UGL1 1544 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 GAPVD1Q14C86 1478 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 A8MUI8 341 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 VGLL3A8MV65 326 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CFLARO15519 480 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 RENP00797 406 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 MT-ND1P03886 318 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 MELTFP08582 738 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 MRPL3P09001 348 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CLTAP09496 248 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 CD1DP15813 335 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF24P17028 368 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 PRKACAP17612 351 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 RGRP47804 291 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 P2RY1P47900 373 aa0.8□□□□□ -2.28
HIF1A-204ENST00000539097 RPL8P62917 257 aaKnown RBP0.8□□□□□ -2.28
HIF1A-204ENST00000539097 XIAPP98170 497 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms